Lynx rufus (bobcat): 124522172
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Entry
124522172 CDS
T08475
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04140
Autophagy - animal
lruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124522172
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124522172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124522172
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lruf04990
]
124522172
Membrane trafficking [BR:
lruf04131
]
SNARE
SNARE associated proteins
Others
124522172
Domain-containing proteins not elsewhere classified [BR:
lruf04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
124522172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lys
RUN
RH_dom
PH
SLT_3
V-SNARE
Motif
Other DBs
NCBI-GeneID:
124522172
NCBI-ProteinID:
XP_046949407
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MLSVVENGLDPRAAIPVIKKKLVGSVKALQKQYVSSDTVVTSEDGDANAMCSALEAVFIH
GLHAKHIRAEAGGKRKKSAHQKPLPQPVFWPLLKAVTHKHIVSELEHLIFVSTDVGRCRA
WLRLALNDGLMECYLKLLLQEPARLCEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSY
KSAILNEWTLTPLALSGLCPLSELDPLTTSGTELQRKESLDSMSHSSGSEDIEVQHSGHK
IRRNRKLTASSLSLDTASSSQLSCSLNSDSCLLQENGSKSPDRSEEPMSYDSDLGTANAD
DSDPSLQEVLSEFSKAQVNSVPTNGLSGLSGEMEIPTGRASLPLPGLEASIPFDVPAEPL
PPQASSGTQDGDRKQEPPPQAPGTLGLLQLGTAKAVPSVSILDQRPSSPVREAAARAVSP
GSGQQKSLEDDGAARSLGVSSPTSPKSRSWISEDDFYRPPQEPPAESPSEHSVASSGGTP
ESRPGLLRHFSQGPRKSHSTGALDQACVPSPGGRPSRAAAAQEHQNFSVVHRRQMGLSNP
FRALMKLGTVERRGAMGIWKELFCELSPLEFRLYLNTEERTCVENCSLLRCEAVGPAHGD
GRFELVFSGRKLALRASSQDEAEDWLDRVREALQKCRPQQEDEWVNIQYPEQPEDPPDAP
QGGLPSHPDPPTEPETLQGTQFCWSSAQVPEPDAIKESLLYLYTDRTWMPYIFXLSLESL
KCFQVRNEKMLSDSHGVETIRDILPDTSLGGPSFFKIIKAKAVLKLQAGNAEEAALWREV
VRKVLASYLEKAEEAVTLGGSLDENCQEVLKFATRENGFLLRYLVAIPTEKGLDSQGCFC
AGCSRQIGFSFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPICRQALRFLT
QIRAQPLISLQLVNASLYEHVEQMRLVRRRREQLKLLGDYLGLCRSGALKELSKRQVHEI
QSHMGRLETADKQSLHLVENEIQASIDQIFSHLERLEILSSKEPPNKRQNAKLRVDQLKY
DVQHLQTALRNFQHRRYAREQQERQREELLSRTFTTNELQFGFITLPHPATHPHTEASRF
LRCSEETSSTSGRSSGPQALSCTFSPPKMMRTLLMSLVSCLVAINEAKLINRCDLARVLH
KEDLDGFEGYSLSDWLCLAFVESNFNLSKVNENADGSFDYGIFQINSRYWCNDYKSHSEN
ICHEDCKELLSPDLLSTINCVKKIVSGAGGMKNW
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggtggtggagaatggactggacccccgggctgccatcccggtcatcaagaag
aagctagtgggatctgtgaaggcgttgcagaagcagtacgtgtcctcggacacagtggtc
actagcgaagacggagatgccaacgccatgtgcagtgccctggaggctgtatttatccac
ggcctgcatgccaagcacatccgagccgaggccggagggaaaaggaagaagagcgcccac
cagaagcctctgcctcagcctgtcttctggcccctcctgaaagctgtcacccacaaacac
atcgtctcggaattggagcacctgatctttgtcagcacggacgtgggccgctgccgggcc
tggctgaggctggccctcaatgacggcctgatggagtgctacctgaagctgctcctccag
gagcccgcccgcctgtgcgagtactatcagcccacagccctgcttcgagacgccgaggag
ggcgagttcctcctcagcttcctgcagggactgacgtccttatccttcgagctctcctac
aagtccgccatcttaaacgagtggacgcttaccccactggctctctctgggctttgcccg
ctctctgagctcgaccccctcaccacctctgggaccgaactacagcggaaagagtctctg
gattcaatgtcccattcctcaggctcggaggacatcgaagtccagcactcaggccataag
atccgacggaaccggaagctcacggcctcctccctcagcctggacaccgccagttcatcc
cagctgtcttgcagcctaaactctgatagctgcctactccaagagaatggctccaagagt
ccagaccgttccgaggagcccatgtcctacgactccgacctggggacagcaaatgccgat
gattcagacccgtctctgcaagaggtattgtcggaattcagcaaagcccaggtaaactct
gtgccaaccaacggactgagcggactgagtggagaaatggagattcccacggggcgggcc
tcactccccctccccggcctggaggccagcatcccttttgatgtgcccgcagagcccctc
ccgccccaagcatcctctgggactcaagatggggaccgcaagcaggagccgcctccccag
gcacctggcaccctgggcttgctgcagttgggcactgccaaagctgtcccctcggtgagc
attttagaccagaggccttccagtcccgtgagagaggcggcggccagagcagtcagcccg
gggagcggccagcagaagtctctggaggatgacggagctgcacggagccttggggtgtcc
tcacccaccagcccgaagagcaggagctggatttcagaggatgacttctaccggcctccc
caggagccgcccgcagagagcccttcagaacactccgtggcttcttccggagggactccg
gagtccaggcctgggctcctccggcatttttctcaagggccaaggaaaagccactccacg
ggggccttagaccaagcgtgcgtgccttccccaggaggccggccaagcagggcagcggcg
gcccaggagcaccagaacttcagcgtggtgcaccgcaggcagatggggctgtccaaccca
ttccgggctctcatgaagctgggcaccgtggagcggcggggggcgatgggcatctggaag
gaactcttctgcgagctctcccctctggagttccgcctctacctgaacaccgaggaacgc
acctgcgtggagaactgctccctgctgcgctgcgaggccgtggggccagcccacggcgac
ggccgcttcgagctggtcttctctggcaggaaactggccctgcgggcctcctcccaggac
gaagccgaggactggctggaccgggtgcgggaggccctacagaagtgccggccccagcag
gaggatgagtgggtgaacatccagtacccggagcagcccgaggaccccccagacgccccc
cagggtggcctcccctcccacccggacccacccactgagcccgagactctccagggcacg
cagttctgttggtcctctgcccaagttcccgagccagacgctattaaagaatcccttctg
tacctgtacacggacaggacctggatgccctatatttttntcctatccttggagtctctg
aaatgcttccaagtgagaaacgagaaaatgttaagtgacagccacggagttgagaccatc
cgagacatcctgccagacacgagcctcgggggcccatctttcttcaaaatcatcaaggcc
aaggccgtcctgaagctgcaggccgggaatgctgaggaggccgccctgtggagggaggtg
gtgcgcaaggtcctggcatcctacttggagaaggccgaggaggcggtgacactgggtggg
agtctggacgaaaactgtcaggaggtgctgaagttcgccacgcgggagaacggcttcctg
ctgcggtacctcgtggccatccccacggagaaaggcctcgactcccagggctgcttctgt
gcaggctgctcccggcagattggcttctcgtttgtacgacccaagctttgtgccttctct
ggcctctattactgcgacatctgccaccaggacgatgcctcggtgattccggccaggatc
atccacaactgggacctcaccaagcgcccgatctgccggcaggctctgaggttcctgacg
cagatccgggcccagcccctcatcagcctgcagctggtgaatgcctcgctgtacgagcat
gtggagcagatgcgccttgtccggaggagacgggagcagctgaagcttctgggggattac
ctgggcctgtgccgaagtggggccctgaaggagctgagcaagaggcaggtccacgagatc
cagtctcacatgggacgcctggagaccgcggacaagcagtctctgcacttagtagaaaac
gaaatccaagcaagcattgaccagatattcagccatctagaacgtctggagattctgtcc
agcaaggagcccccgaacaaaagacagaatgccaaacttcgtgttgaccagttaaagtat
gatgtccagcacctgcagactgctctcagaaacttccagcatcggcgatacgcaagggag
cagcaggagagacagcgagaggaacttctgtctcgaaccttcaccactaacgagctccaa
ttcggattcatcaccttgccccaccccgcaactcacccgcacacggaagcgtctagattc
ctcaggtgctcagaggagaccagcagcacgtctgggagatcctcgggaccacaggccctc
agctgcaccttctcccctccgaagatgatgaggacgctactcatgtccttggtcagctgc
ctcgttgccataaatgaggcgaagctcatcaatcgctgtgacttggccagagtgctgcac
aaggaggatctggatgggtttgagggctactcgctgagtgactggctgtgcctggctttt
gtggagagcaacttcaacctatcaaaggtaaatgaaaatgcagacggcagcttcgactat
ggcatcttccagatcaacagccgctactggtgcaatgattacaagagtcactcggaaaac
atttgccacgaggactgcaaagaactgctgagccccgatcttctctcaaccatcaactgt
gtgaaaaagattgtgtctggagcagggggaatgaagaactggtga
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