Lynx rufus (bobcat): 124522205
Help
Entry
124522205 CDS
T08475
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf01524
Platinum drug resistance
lruf03440
Homologous recombination
lruf03460
Fanconi anemia pathway
lruf04120
Ubiquitin mediated proteolysis
lruf04151
PI3K-Akt signaling pathway
lruf05206
MicroRNAs in cancer
lruf05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124522205
09124 Replication and repair
03440 Homologous recombination
124522205
03460 Fanconi anemia pathway
124522205
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124522205
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
124522205
09162 Cancer: specific types
05224 Breast cancer
124522205
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
124522205
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lruf01009
]
124522205
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124522205
03036 Chromosome and associated proteins [BR:
lruf03036
]
124522205
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124522205
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124522205
Protein phosphatases and associated proteins [BR:
lruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124522205
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124522205
Multi subunit type E3
BRCC complex
124522205
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124522205
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124522205
BRCA1-A complex
124522205
BRCA1-B complex
124522205
BRCA1-C complex
124522205
BRCA complex
124522205
FA (Fanconi anemia) pathway
Downstream FA components
124522205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
BRCT_2
zf-Nse
zf-RING_6
zf-ANAPC11
zf-RING_10
zf-rbx1
Prok-RING_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
124522205
NCBI-ProteinID:
XP_046949473
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MDLSADRVEEVQSVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQ
CPLCKNDITKRSLQESTRFSQLVEELLNIIHAFELDTGLQFANSYNFSKKENNSPEHLKE
EVSIIQSMGYRNRAKRLRQSEPENPNLQETSLSVQLSNFGIVRSLRTKQQIQPQNKSVYI
DLGSDSSEDTVNKASYFSVGDDELLGITPQGARAEASLNPAKKASCEFSEDITNIEHRQP
SNKDLTATEKHATEKHPEKYQGISVSNLHVEPCATNTHASSLQHENSSLLLTKGRMNVEK
AEFCNESKQPGVARSQQSRWAESKETCNDRQTPSTEKKVVLNADPLCRRKLSKQKSPCSD
SPRDSQDVPWITLNSSIQKVNEWFSRSDEMLTSDDSHDGGSESNPGVAGAVEVPNVVDGY
SGSSEKIDLMASDPHDALICESERVHTKPVESNIEDKIFGKTYRRKASLPNLSHTSEDLI
IGACAIEPQIMQAHPLTNKTKRKRRSTAGLHPEDFIKKVDLAIVQKTPEKLIEGTDRIGQ
NGHVMNITNNGPENGTKGDYVQKEKNAKPTESLEKESAFRTKAEPISSNISNMESELNSH
SSRAPKENRLRRKSSTRHMRALELVVNRNPSPPDHTELQIDSCSSSEEMVKRKSSEQMLV
RHSKTLQLVENKEPAPGAKKRNKPSKQINKRLASNTFPELNLTNIPGVFTNCSSSNTLQE
FVNPGIQREELEESRGTIHVSDRTRDPKALVSSGGRSLQTERSVESTSISLVPDADYGTQ
DSISLLEADTPGKAKTAPNQHVSLCAAIENPKEAIHGCSKDTRNGTEGFTDPLRRADNHT
QGTSIEMEENELDTQCLYNTFKVSKRQSFALFSNPGNPEKECATVWARSTSLRKQSPKVA
LEYEQKEENQGKKQSEIKHVQAVRATAGFSAVSQKVEKPGDYAKCSIKGVPGLCQSSQFR
GNETELFIANNHDISKNPYHIPPLSPIRSSVNAVCKKNLSEEKFEQRSMSPERAVRNESV
IQSTVSTISQNNIRENTFKEVSSSSVNEVGSSANEVGSSINEVGSSGENIQTELGRNRGP
KLSAMLRLGLMQPEVYEQSLPVSNCKCPEMKRQGENEGVVQSVNADFSPCLISDNVEQPM
ESSRASQVCSETPNDLLNGDEIKGKISFAESAKERSAVFGKSVQKGEFRRSPSPLDHTHL
AQGHQTETRKLESSEENVSSEEEELPCFQHLLFGKVTSIPSQSTSHNAIATEGLSKKTEA
NLESLKDSLHDCSNQVTSAKESQEHHLSEEARCSGSLFSSQCSASEDSAVNTNTQDPFLM
FDPPSKQVRHQSENVDVLSDEELVSYDDEREPGLEEDNHEEEQSVDSNLGEAASGYESET
SLSEDCSGVSSQSDILTTQQRDTMQDNLIKLQQEMAELEAVLEQHESQPSNSSPALITDS
YAPEDLFNPEQNTSEKAVLTSEKSSDCLISQNPESLSADKFQVSLDSSTSKTKEPGMRRS
SPSQSRLLDTRQCVRSHSSSLQSTNCLSQKELIKAVGGEELQLTKSEPRDFMEQSYLPRQ
DLEGTPYFESGISLFSDDPESDLSVDRAPEPVHVSSMPTSTSALKLPQFQVEESAKSTAA
VHITNTAGYNKREDIEGKEKPEMMSSTKRVNKRISMVASGLTPKELVLVQKFARRHQITL
TNVISEETTHVIMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLDEHDFEV
RGDVVNGRNHQGPKRARESRDRKIFGGLEICCYGPFTNMPTDQLEWMVRLCGASVVKRPS
LFTLSKATHPVVVVQPDAWTEDSGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIP
QIPRATADLSQPCV
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggatttatctgcagatcgtgttgaagaagtacaaagtgtccttaatgctatgcagaaa
atcttagagtgtccaatctgtctggagttgatcaaagagcctgtttccacaaagtgtgat
cacatattttgcaaattttgtatgctgaaacttctcaaccagaggaaagggccttcacag
tgtcctttgtgtaagaatgatataaccaaaagaagcctacaggaaagtacaagatttagt
caacttgttgaagagctgttgaacatcattcatgcttttgagcttgacacaggattgcag
tttgcaaacagctataacttttcaaaaaaggaaaataactctcctgagcatctgaaggag
gaggtttctattatccaaagtatgggctatcgaaaccgtgctaaaagacttcgacagagt
gaacctgaaaaccctaacttgcaggaaaccagtcttagtgtccaactctctaactttgga
attgtgagatctctgaggacaaagcagcagatacaaccacagaataagtctgtctacatt
gacttgggatctgattcttctgaagatacagtgaataaggcaagttatttcagtgtggga
gatgacgaattgttaggaatcacccctcaaggagccagagctgaagccagtttgaatcct
gcaaaaaaggcctcttgtgaattttctgaggacataacaaatattgaacatcgtcaaccc
agtaataaagacttgaccgccactgagaagcatgcaactgaaaagcatccagaaaagtat
cagggtatttctgtttcaaacttgcatgtggagccatgtgccacaaatactcatgccagc
tcattacagcatgagaacagcagtttattactcactaaaggcagaatgaatgtagaaaag
gctgaattctgtaatgaaagcaaacagcctggcgtagcaaggagccaacagagcagatgg
gctgaaagtaaggaaacatgtaatgataggcagactcccagcacagagaaaaaggtagtt
ctgaatgctgatcccctgtgtaggagaaaactgagtaagcagaaatctccatgctctgac
agtcctagagattcccaagatgtaccttggataacactgaatagtagcatacagaaagtt
aatgagtggttttccagaagtgatgaaatgttaacttctgatgactcacatgatggggga
tctgaatcgaatcctggagtagctggtgcagtagaagttccaaatgtagtggatggatat
tctggttcttctgagaaaatagacttaatggccagtgatcctcatgatgctttgatatgt
gaaagtgaaagagtccacaccaaaccagtagagagtaatattgaagataaaatatttggg
aaaacctatcggaggaaggcaagccttcctaacttgagccacacaagtgaagatctcatt
ataggagcatgtgctatagaacctcagataatgcaagcccatcccctcacaaataaaaca
aagcgtaaaaggagatctacagcaggacttcatcctgaggattttatcaagaaagtagat
ttggccattgttcaaaagactcctgaaaagctaattgagggaaccgatcgaatagggcaa
aacggtcatgtgatgaatataacaaataatggtcctgagaatgggacaaaaggtgattat
gttcagaaagagaaaaatgctaagccaacagaatcattggaaaaagaatctgcttttaga
accaaagctgaaccaataagcagcaatataagtaatatggaatcagaattaaatagccac
agttcaagggcacctaaggagaacaggctgaggaggaagtcctctaccaggcacatgcgt
gcgctggaattagtagtcaatagaaatccaagcccacctgatcataccgaactacagatt
gatagttgttctagcagtgaagagatggtgaaaagaaaaagttcggaacaaatgctagtc
agacacagcaaaacacttcaactcgtggaaaataaagaacctgcacctggagccaagaag
cgtaacaagccaagtaaacaaataaataaaagacttgccagtaacacttttccagagctg
aatttaacaaacatacctggggtttttactaactgttcaagttctaatacacttcaagag
tttgtcaaccctggcattcaaagagaagaactagaagagagccgaggaacgattcacgtg
tctgataggaccagagatcccaaagcgctggtatcgagtggaggaagaagtttgcaaact
gaaagatctgtagagagtaccagtatttcactggtacctgatgccgattatggcactcag
gatagtatctcattactggaagctgacaccccagggaaggcaaaaacagcaccaaatcaa
catgtgagtctgtgtgcagcaattgaaaaccccaaggaagctatccatggttgttccaaa
gatactagaaatggcacagagggttttacagatcctctgagacgtgcagataaccatact
caagggacaagtatagaaatggaagagaatgaacttgatacgcagtgtttatacaatacg
ttcaaggtttcaaaacgtcagtcatttgctctgttttcaaatccaggaaatccagaaaag
gaatgtgctacagtctgggcccgttccacgtccttaaggaaacaaagtccaaaagtcgct
cttgaatatgaacaaaaagaagaaaatcagggaaagaaacagtctgaaatcaagcacgtg
caggcagtccgtgcaactgcaggcttttctgcagtcagtcagaaagtggagaagccaggt
gattatgccaaatgtagcataaaaggagtccctgggctctgtcagtcatctcagttcaga
ggcaatgaaactgaactctttattgcaaataaccatgacatttcaaaaaacccttatcat
ataccaccactttctcccatcagatcatctgttaatgctgtatgtaagaaaaacctgtca
gaggaaaagtttgagcagcgttcaatgtcacctgaaagagcagtgagaaatgagagcgtc
attcaaagtacagtgagcacaattagccaaaataacattagagaaaacacttttaaagaa
gttagctcaagcagtgttaatgaagtaggttccagtgctaatgaagtaggctctagcatt
aatgaagtaggttccagtggtgaaaacattcaaacagaactgggtagaaaccgaggacct
aagttaagtgctatgctcaggttaggtcttatgcaacctgaagtctatgagcaaagtctt
cctgtaagtaattgtaaatgtccagaaatgaaaaggcaaggagaaaatgaaggagtagtt
cagtctgttaatgcagatttttctccatgtctaatttccgataatgtagaacaacctatg
gaaagtagccgtgcttctcaggtttgttctgagacacccaatgacctattaaatggtgat
gaaataaagggaaaaatcagctttgctgaaagtgctaaggaaagatctgctgtttttggc
aagagtgtccagaaaggagaattcagaaggagccctagccctttagaccatacacatctg
gctcagggtcaccaaacagagaccaggaagttagagtcctcagaagagaacgtgtctagt
gaggaggaagagcttccctgcttccaacacttactatttggtaaagtaaccagtatacct
tctcagtctaccagccataatgccattgccacggagggtctgtctaagaaaacagaggcg
aacctagaatcattgaaggatagcttacatgactgcagtaaccaggtaacatcagcaaag
gagtcccaggaacatcaccttagtgaggaagcgaggtgttccggtagcttattttcttca
cagtgcagtgcatcggaagactcggctgttaatacaaatacccaggatcctttcttgatg
tttgatcctccttccaaacaagtgaggcatcagtccgaaaatgtggacgttctgagtgat
gaggaattggtttcatatgatgatgaaagggaacctggcctggaagaagataatcacgaa
gaagagcagagtgtggattcaaacttaggtgaagcggcatctgggtacgagagtgaaaca
agcctctctgaagactgttcaggggtgtcctctcagagtgatattttaaccactcagcag
agggataccatgcaagacaacctgatcaagctccagcaggaaatggccgaactggaagcc
gtgttagagcagcacgagagccagccttctaacagctcccctgccctcataacagattct
tatgcccctgaggacctgttcaatccggaacaaaacacatcagagaaagcagtattaact
tcagagaaaagtagtgactgccttataagccagaatcccgaaagcctctctgctgacaaa
tttcaagtatctctggatagttccaccagtaaaactaaagaaccgggaatgagacggtct
tctccttctcaatcccggctgttagatactaggcagtgtgtgcgcagccactcaagcagt
cttcagagcacaaactgcctgtctcagaaggagctaattaaggctgtcggtggggaggag
ctacaactgactaagtcagagccccgagatttcatggagcagtcttatttgccaagacaa
gatctggagggaaccccttacttcgaatctggaatcagcctcttctctgatgaccctgag
tctgatctctctgtggacagagccccagaaccggttcatgttagcagcatgccaacttca
acctctgccttgaaattaccccaatttcaagttgaagaatcagccaagagtacagctgct
gttcatattactaatactgctgggtataataagagggaagacattgagggcaaggagaaa
ccagaaatgatgtcttcaacaaaaagagtcaacaaaagaatatctatggtggcatcaggc
ttgactccaaaagaattggtgcttgtgcagaagtttgccagaagacaccaaatcacctta
actaatgtaatttctgaagagactactcatgtcattatgaaaacagatgctgagtttgtg
tgtgaacggacactgaaatattttctgggtattgcaggaggaaaatgggtagttagctat
ttctgggtgacccagtccattaaagaaagaaagatgctagatgagcatgattttgaagtc
agaggagatgttgtcaatggaagaaaccaccagggtccgaagcgagcaagagaatcccgg
gacagaaagatcttcgggggcctagaaatctgttgctatgggccctttaccaacatgccc
acagatcaactagagtggatggtgcgcctctgtggggcttctgtggtgaagaggccttcg
ttattcactctcagcaaggctactcacccagttgtggtcgtgcaaccggatgcctggaca
gaggacagtggcttccatgcgattgggcagatgtgtgaggcacctgtggtgacccgagag
tgggtattggacagtgtagccctctaccagtgccaggagctggacacctacctgatcccc
cagattcccagagctactgctgacctcagccagccatgtgtgtag
DBGET
integrated database retrieval system
