Lynx rufus (bobcat): 124522500
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Entry
124522500 CDS
T08475
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf00514
Other types of O-glycan biosynthesis
lruf04330
Notch signaling pathway
lruf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124522500
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124522500
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124522500
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lruf01003
]
124522500
Enzymes [BR:
lruf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
124522500
Glycosyltransferases [BR:
lruf01003
]
Glycan extension
O-Glycan
124522500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
124522500
NCBI-ProteinID:
XP_046949914
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLSLPRAPAPAPTPGPGPRAPPARLATAPRLRP
DDVFIAVKTTQKNHGPRLGLLLRTWISRARQQTFIFTDGDDPELQLQGGSHVINTNCSAV
HTRQALCCKMAVEYDKFIESGRKWFCHVDDDNYVNPEGLLQLLSTFSPSQDVYLGRPSLD
HPIEAAERVQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDD
CTVGYIVEGLLGARLLPSSLFHSHLENLQRLPPDAVLQQRTGPRQQAPAQAASAVADRAG
GRARWLEQGCPRTCASHPPEPDASLVFRVTLSYGGPENPRNVVNVAGGFSLQQDPTRFKS
VHCLLYPDTDWCPVHKQSDLVSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgcgcggggggcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctgctgctgctgccgctgccgctgtcgctgccccgcgcgccggccccggccccgact
ccgggccccggcccgcgcgcgccccccgcccgactcgccaccgccccccgcttgcggccg
gacgacgtcttcatcgcggtcaagaccacccagaagaaccacgggccacgcctcgggctg
ctgctgcgcacctggatctcccgggcccgccagcagacattcatcttcaccgatggggat
gaccctgagctacagctccagggaggcagccacgtaatcaacaccaactgctcggccgtg
cacacccgtcaggcgctatgctgtaagatggccgtggagtacgacaagttcatcgagtcc
ggacgcaagtggttctgccatgtggatgacgacaactacgtgaaccccgaaggcctgctc
cagctgctgtccactttctcgcccagccaggatgtctacctggggcggcccagcctcgac
caccccattgaggccgccgagagagtccagggaggcggaactgtgaccactgtcaagttc
tggttcgctaccggtggggccgggttctgcctgagcagagggctcgctctgaagatgagc
ccctgggccagcctgggcagcttcatgagcactgctgagcgggtgcggctgccggacgac
tgcacggtgggctacatcgtggaggggctgctgggtgctcgcctgctgcctagctcactc
ttccactcccacctggagaacctgcagaggctgccgcctgacgccgtgctgcagcagcgg
acgggcccacggcagcaggcgccagcccaggcggcgagtgccgtcgcagaccgggccgga
ggaagggccaggtggcttgagcagggctgcccccgcacgtgcgccagccaccctcctgag
ccggatgccagcctcgtcttccgcgtcaccttgagctacgggggtcctgagaacccacgt
aacgtggtgaatgtggcaggaggcttcagcctgcagcaggatcccactcggtttaagtct
gtccactgccttctctacccggacacagactggtgtcccgtgcacaagcagagtgacctc
gtctctcggtga
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integrated database retrieval system
