KEGG   Lynx rufus (bobcat): 124524451
Entry
124524451         CDS       T08475                                 
Name
(RefSeq) low-density lipoprotein receptor isoform X1
  KO
K12473  low-density lipoprotein receptor
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03272  Virion - Hepatitis viruses
lruf04144  Endocytosis
lruf04913  Ovarian steroidogenesis
lruf04925  Aldosterone synthesis and secretion
lruf04927  Cortisol synthesis and secretion
lruf04934  Cushing syndrome
lruf04976  Bile secretion
lruf04979  Cholesterol metabolism
lruf05145  Toxoplasmosis
lruf05160  Hepatitis C
lruf05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    124524451
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124524451
 09150 Organismal Systems
  09152 Endocrine system
   04913 Ovarian steroidogenesis
    124524451
   04925 Aldosterone synthesis and secretion
    124524451
   04927 Cortisol synthesis and secretion
    124524451
  09154 Digestive system
   04976 Bile secretion
    124524451
   04979 Cholesterol metabolism
    124524451
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    124524451
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    124524451
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124524451
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    124524451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lruf04131]
    124524451
Membrane trafficking [BR:lruf04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    124524451
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF EGF_LRP2 EGF_3 hEGF Psg1 Gag_p24 NBP1
Other DBs
NCBI-GeneID: 124524451
NCBI-ProteinID: XP_046952682
LinkDB
Position
Unknown
AA seq 866 aa
MRAAGWGLNWAAALFLAAVGTAVADKCGRNEFQCQDGKCISYKWVCDGSAECLDASDESQ
ETCMSVTCKPGDFSCGGRVNRCIPEFWRCDGQVDCENGSDEQGCLPKTCAQDEFRCQDGK
CISLEFVCDSDRDCLDGSDEASCPMPTCSPAHFQCNNSACIPELWACDGDPDCKDGSDEW
PQRCGGRNMSAPQGDDNPCSALEFHCHSGECIHSSWRCDGGPDCKDKSDEENCAVATCRP
DEFQCSDGTCIHGSRQCDREYDCKDMSDELGCINVTLCEGPNKFKCHSGECITLDKVCNS
VRDCRDWSDEPLKECETNECLDNRGGCSHICNDLKIGYECLCPEGFQLVDQRRCEDIDEC
QDPDVCSQLCVNLEGSYKCECEAGFQLDPLTKACKAVGTIAYLFFTNRHEVRKMTLDRSE
YTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPGFSSYDTVVSEDLQAPDG
LAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFKEKGSKPRAIVVDPVHGFMYWTDWGT
PAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTV
LEDEKKLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSDINLLAENLLSPEDIVLFHNL
TQPRGVNWCERTALRNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAKDMRSCLIEPEPV
VTPRATSTVTVRPTVRSTAVRTTVRPPTAGPKHTAGPWSVASPEFTTPETVTVSHQALGD
AASRGDEERPRSVGALYVILPIVLLILLGFGTFLLWKNWRLKSINSINFDNPVYQKTTED
EVHICCSQDGYTYPSRQMVSLEDDVA
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgagggccgcgggctgggggctgaactgggccgccgccctgttcctcgcagcggtgggg
acggcagtggcggacaaatgtgggagaaacgagttccagtgccaagatggaaagtgcatc
tcctacaagtgggtttgtgacgggagcgccgagtgcctggatgcctcagatgagtcccag
gagacctgcatgtctgtcacctgcaagccgggggacttcagctgtgggggccgtgtcaac
cgctgcatccctgagttctggagatgtgacggccaggtggactgcgagaatggctcagac
gagcaaggctgtctgcccaagacgtgtgcccaggatgagttccgctgccaggacgggaag
tgcatctccctggagttcgtctgtgattcggaccgcgactgcttagacgggtccgatgag
gcgtcctgccccatgcccacctgcagccccgcccacttccagtgcaacaactccgcctgc
atccctgagctgtgggcgtgcgacggcgacccggactgcaaggatggctcagatgagtgg
ccgcagcgctgcgggggccgcaacatgtcggccccacaaggggacgacaacccctgctca
gcgctggagtttcactgccacagtggcgagtgcatccactcgagctggcgctgtgacggc
ggccctgactgcaaggacaagtctgacgaggagaactgcgctgtcgccacctgccgacct
gatgagttccagtgctcggatgggacctgtatccatggtagccggcagtgcgaccgggag
tatgactgtaaggacatgagcgacgagcttggctgcatcaatgtgacgctgtgcgagggg
cccaacaagttcaagtgccacagcggcgaatgcatcaccctggacaaagtgtgcaactcg
gtccgggactgtcgggactggtcggacgagcctctgaaggagtgcgagaccaacgagtgt
ctggacaacaggggcggctgctcccacatctgcaacgacctcaagatcggctatgagtgc
ttgtgccccgagggcttccagctggtggaccagcgaagatgtgaagatatcgatgagtgt
caggatcccgacgtgtgcagccagctctgcgtgaacctcgagggcagctacaagtgcgag
tgcgaggcgggtttccagctggaccccctcaccaaggcctgcaaggctgtgggcactatc
gcctacctgtttttcaccaaccgccacgaggtgaggaagatgaccctggaccgcagcgaa
tacaccagcctcatcccaaacttgaagaacgtggtcgccctggacaccgaggtggccagc
aacagaatatactggtccgacctgtcccaaaggaagatctacagtacccaaatcgacaga
gcccccggcttctcctcctatgacaccgtcgtcagcgaggacctccaggcccccgatggg
ctggcggtggactggatccacagcaacatatactggacagactccatcctgggcaccgtc
tctgtggccgacaccaagggtgtgaagagaaagacgctcttcaaggagaaaggctctaag
ccacgtgccatcgtggtggatcccgttcacggcttcatgtactggacggattggggaacc
cccgccgagatcaagaaggggggtctgaacggcgtcgatgtttactcgctagtgacggag
gacatccagtggcccaatggcatcaccctggatctttctggtggccgcctctactgggtt
gactccaagctccactccatctcgagcattgatgtcaacggggggaaccggaagaccgtt
ttggaggatgagaaaaagctggcacaccccttctccttggccatctttgaggataaagta
ttttggacggacatcatcaatgaagccattttcagtgccaaccgcctcaccggctcagac
attaatctgctagcagaaaacctgttgtccccggaggacattgtcctttttcacaacctc
acacagccaagaggggtgaactggtgtgagaggacggccctccgcaacggtggctgccag
tacctgtgtctcccggccccacagatcaacccccactcacccaagttcacctgtgcctgc
ccggatggcatgctgctggccaaggacatgaggagctgcctcatagagcccgaacctgtc
gtgaccccccgggcgacctccacggtcacggtcaggccaacggtgcgctccacagccgtg
aggacgacagtgcgccccccaaccgcggggccaaagcacacagccggcccgtggtccgtg
gccagccctgagttcaccacgcctgagacggtgacagtgtcccaccaagccctgggcgac
gctgccagcagaggagacgaggagagaccgaggagcgtgggggccctgtacgtcatcctc
cccatcgtgctgctcatcctcctgggcttcgggaccttccttctctggaagaactggcgg
ctgaaaagcatcaacagcatcaactttgacaaccccgtgtaccagaagaccacggaggac
gaggtccacatctgctgcagccaggacggctacacctacccttcgagacagatggtcagc
ctggaggacgatgtggcctga

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