Lynx rufus (bobcat): 124525096
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Entry
124525096 CDS
T08475
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124525096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124525096
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
124525096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
124525096
NCBI-ProteinID:
XP_046953526
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MNQPAPRPPPPPRRVRLKPWLVAQVNSCQYPGLQWVNGERKFFYIPWRHATRHGPSQDGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSNGHAPAESQPSEDYAFGAGEEEEEEEEELQRMLPSLSLTEAVQPGPPMAPYSLPKEDV
KWPPTLQPPVVLGPPAPDPTRLLGPTPGNPADFGELLPAVLPSLQPGSLAASLPPTGEQL
LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVSL
EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
GSQPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLI
TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPV
AQAPPVAGLGAGQVAWPMHPVGMQQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccggcccccaggcccccccctccaccccgccgtgtgcgactcaagccctgg
ctggtggcccaggtgaacagctgccagtacccagggcttcagtgggtcaatggggagagg
aaattcttctacatcccctggcgccatgccacacggcacggccccagccaggacggagat
aataccatcttcaaggcctgggccaaggagacaggaaagtacaccgaaggggtggacgag
gcagacccggccaagtggaaggccaacctgcgctgtgcccttaacaagagccgtgacttc
cgcctcatctatgatggaccccgggacatgccacctcagccctacaagatctacgaggtc
tgctctaatggccacgctcctgcagagtcacagcccagtgaggattacgcttttggtgca
ggagaggaggaggaggaggaagaggaagagctccagaggatgttaccaagcctgagcctc
acagaagcagtgcaacctggcccccccatggcaccctattccttacccaaagaggatgtc
aagtggccacccactctccagccacctgtggtgctgggccctcctgcaccagaccccacc
cgcctcctgggccccacccctggcaaccctgctgactttggggagcttctccctgcggtc
ctgccgagcctgcagcctgggtccctggctgccagcctgccccccacaggcgaacaactc
ctgcccgacctgctgatcagcccccacatgctgcctttgactgacttggagatcaagttc
cagtaccgggggcgaccaccccgtgccctcaccatcagcaacccacagggctgccggctc
ttctacagccagctggaggccacccaagagcaggtagagctctttggccccgtgagcctg
gaacaagtgcgcttccccagccctgaggacatccccagcgacaagcaacgcttctacaca
aaccagttgctggatgtcctggaccgcgggcttatactccagctgcaaggccaagatctg
tatgccatccgcctgtgccagtgcaaggtgttctggagcgggccctgcgcctcagcccac
ggctcacagcccaaccccatccagcgggaggtcaaaaccaagctcttcagcctggagcat
tttctcaatgagctcatcctgttccagaagggccagaccaacaccccgccaccatttgag
atcttcttctgctttggggaggagtggcctgacctcaaaccccgagagaagaagctcatc
actgtacaggtggtgcctgtagcagctcggctgttgctggagatgttctcaggggagctt
tcttggtcagctgatagtatccggctacagatctcaaacccagacctcaaagaccacatg
gtggaacagttcaaggagctccatcacatctggcagtcccagcagcggttgcagcctgtg
gcccaggcccctcctgtggcaggtcttggtgctggtcaggtggcctggcccatgcaccca
gtcggcatgcaacaatga
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integrated database retrieval system