Lynx rufus (bobcat): 124526492
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Entry
124526492 CDS
T08475
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03018
RNA degradation
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124526492
09123 Folding, sorting and degradation
03018 RNA degradation
124526492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124526492
03041 Spliceosome [BR:
lruf03041
]
124526492
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124526492
mRNA degradation factors
5'-3' decay
Lsm complex
124526492
Spliceosome [BR:
lruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124526492
Complex C
U2 snRNP components
124526492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
vATP-synt_E
TIG_SUH
COG5_N
Motif
Other DBs
NCBI-GeneID:
124526492
NCBI-ProteinID:
XP_046955474
LinkDB
All DBs
Position
Unknown
AA seq
126 aa
AA seq
DB search
MRKDERSQSNGLSLYLKKLQGLKHGADDLDQQQTTNTVEEPLDLIRLSLDERIYVKMKNN
RELRGRLHAYDQHLNMILGDVEETMTTIEIDEETYKEVYKSTKRNIPMLFVQGDGVVLVA
PPLRVG
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagatgaaaggtctcaaagcaatggcctcagtttataccttaagaaacttcag
ggtttgaaacatggcgcagatgacttggaccagcaacaaactaccaacaccgtagaggag
cccctggatctcatcaggctcagcctggatgagcgaatttatgtgaaaatgaaaaataac
agagagcttcgaggcagattacatgcttatgaccagcatttaaatatgatattgggagat
gtggaagagactatgactaccatagaaattgatgaggaaacctacaaggaggtatataaa
tcaacaaaacggaatattccgatgctctttgtccagggagatggtgttgttctagttgcc
cctccattaagagttggctga
DBGET
integrated database retrieval system
