Leptotrichia rugosa: AB8B22_07385
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Entry
AB8B22_07385 CDS
T10901
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lrug Leptotrichia rugosa
Pathway
lrug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB8B22_07385 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrug03400
]
AB8B22_07385 (nth)
Enzymes [BR:
lrug01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB8B22_07385 (nth)
DNA repair and recombination proteins [BR:
lrug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB8B22_07385 (nth)
Prokaryotic type
AB8B22_07385 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Ferrochelatase
Motif
Other DBs
NCBI-ProteinID:
XDU66239
UniProt:
A0AB39VGC9
LinkDB
All DBs
Position
complement(1491378..1492022)
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AA seq
214 aa
AA seq
DB search
MTKKERFDKVFPILEKKFGKAKAALNYETPFQFMIAVILSAQCTDARVNIVTKELFKVVK
NPEDIRKMDIKTLEEYIKSTGFFRNKAKNIKLNAQMMKEKYNDKLPRTIEELLVLLGVGR
KTTNVILGDLWNIRQGIVVDTHVKRLSNLIGFVESDNPEIIERELMKFVPKKYWFEYSHY
LILHGRDKCVARRPKCLECEINKYCKHGQKLINK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaagaaagatttgataaagtatttccgatattggaaaaaaagtttggtaaa
gcaaaagcagctctgaattacgaaacgccatttcagtttatgatagctgtaatactttca
gcgcaatgcacagatgcaagagtaaatattgttacaaaagagctgtttaaagtggttaaa
aatccagaagatattagaaaaatggatattaagacattggaagaatacattaaatcgacg
ggattttttagaaataaagctaaaaatataaaattaaatgcccaaatgatgaaagaaaaa
tataatgacaaattgccaagaacaattgaagaattactagttttgctaggagttgggaga
aagactaccaatgtcatattgggagatttgtggaatataagacaaggaattgtcgtagat
acgcatgttaaaagactctcaaatttaattggatttgttgaaagtgataatccagaaatt
attgaaagagaacttatgaaatttgtaccaaaaaaatattggtttgaatactcgcactat
ttgattttgcacggtagagataaatgcgtagccagaagaccaaaatgtttggaatgtgaa
ataaataaatattgtaaacatggacaaaagttaattaataaataa
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