Leptotrichia rugosa: AB8B22_09090
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Entry
AB8B22_09090 CDS
T10901
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lrug Leptotrichia rugosa
Pathway
lrug01501
beta-Lactam resistance
lrug01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lrug00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB8B22_09090
01503 Cationic antimicrobial peptide (CAMP) resistance
AB8B22_09090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrug03036
]
AB8B22_09090
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrug02000
]
AB8B22_09090
01504 Antimicrobial resistance genes [BR:
lrug01504
]
AB8B22_09090
Chromosome and associated proteins [BR:
lrug03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AB8B22_09090
Transporters [BR:
lrug02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB8B22_09090
Antimicrobial resistance genes [BR:
lrug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB8B22_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
HH_CzcB
BSH_RND
HH_MFP_RND
HH_AprE
BSH_CusB
HH_YBHG
Biotin_lipoyl
OEP
Beta-barrel_AprE
BSH_LcnD
BSH_YhbJ
Beta-barrel_YknX
Beta-barrel_RND
RND-MFP_C
TPR_MLP1_2
HH_EMRA
BSH_YknX
DUF4407
Utp11
YfdX
Motif
Other DBs
NCBI-ProteinID:
XDU66550
UniProt:
A0AB39VFT3
LinkDB
All DBs
Position
complement(1785919..1787115)
Genome browser
AA seq
398 aa
AA seq
DB search
MKINKKIVAVVAILAMFSISCGKKKLKMSSSSRPVKVQMIGQNEISIGYSASGTIKGIEE
IPYTATSSGEVVAINAQNGDYVNAGQVIVSIENQAAKSGVRSAASNVRTAESNISSARAD
ISASEGNISSAQAAVEEARINFRKYQMLYDKRLITETDYLQAKTQLSAAQAKLDSARSSY
HTAVNSLSARRNSLDSAQADLDTARDTNSKSSIKTKVSGVIANMNLERSQEVSNGQQLFT
LVNESEMKLEIGVSADIVQKIQIGTPATVRIDDLKGKEINGVVYEVAATADSESRQFIVK
IKLPNENRELRSGMYAKANISTGAENGLVIPKKAIVVRGVQQVIYVVRNGKAVAIPINIT
NQNETFAAVTGQGLDSGDELIVDGQNVVQANEKVKIVR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaataaaaaaatagttgcagtagtggcaattctagcgatgttttcaatttca
tgtggaaagaaaaagctaaagatgtctagctcttcaagaccagtgaaagttcaaatgata
ggtcaaaatgaaatttctataggatattctgccagtggaacgataaaagggattgaggaa
ataccgtatacagcgacttcaagtggagaagtagtggcaattaatgcacaaaatggagat
tatgtgaatgcaggacaagtgatagtttcgattgaaaatcaggcggctaaatctggagtg
agatcggcagcttcaaatgttcgaacggctgagtcaaacataagttcggcaagagcggat
attagtgcatcagaaggaaacataagttcagcacaggccgctgtcgaagaagcaagaatt
aactttagaaaatatcaaatgctgtatgacaaaaggctaataacggaaactgattattta
caggcaaaaacacagttaagtgcggcacaagctaagctagattcagcaagaagcagttat
cacacagcagtaaattcactgtctgccagaagaaatagtcttgattcagcacaagcggat
cttgatacagcaagagatacaaatagtaaatcaagcataaaaacgaaggtttcgggagta
attgccaatatgaatttggagagaagtcaagaagtttcaaatggacagcaattgtttact
ttagttaatgaaagtgaaatgaaattggaaattggagtttcagccgatattgttcagaaa
attcaaattggaacaccagcaactgttagaattgacgacttgaaaggaaaagaaatcaat
ggtgtagtttatgaagttgcggcaacagctgattcagagagtagacaatttattgtaaaa
ataaaacttccaaatgaaaatagagaactaagaagtggaatgtatgcaaaggctaatatt
tcaacaggagcagaaaatggtttagtaattcccaaaaaagccattgttgtaagaggagtt
caacaagttatttatgtcgtgcgaaatggaaaagcagtagcaattcctataaatataaca
aatcaaaacgaaacatttgcggcagtgacagggcaaggtttagattctggtgacgaatta
attgtcgatggacaaaatgttgtacaagcaaatgaaaaagtcaaaattgtcagatag
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