Littorina saxatilis: 138948487
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Entry
138948487 CDS
T10665
Name
(RefSeq) ATP-dependent RNA helicase A-like isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138948487
03012 Translation factors [BR:
lsax03012
]
138948487
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138948487
5.6.2.6 RNA 3'-5' helicase
138948487
Spliceosome [BR:
lsax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138948487
Translation factors [BR:
lsax03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138948487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
ATPase
AAA_19
nSTAND3
MAP70
AAA_22
Motif
Other DBs
NCBI-GeneID:
138948487
NCBI-ProteinID:
XP_070176144
LinkDB
All DBs
Position
LG15:complement(9929379..10001813)
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AA seq
1234 aa
AA seq
DB search
MALDIKQYLYSWLGKQKLMPEYEFSAGGGPKHRQRFKCELRVEGLDYVGVGNSTSKKDAQ
ANAARDFVNFLVRVGKMDGKDIPSAVPSVPEGGGDAFGGGPREPGSTALPGGMMMPHQKL
GLDGEGSSPGPSGPIREFPLYQRGPPQEYLDRIAEKRRLEESEDVDMNAEIHGNWTCENA
KSRLHQFLQTSRIQTDYKYAVVGPDHNRSFYAEMGFYVKKINQQIHAREPGSNKQTASKS
CALSLIRQLFHLGAIEAFTGVKKKKDSENLPAYEVAVNPETVQQIDQCLQAWSIQPVDKN
RLTFGEVEEGQSNSLLMCETLEEFEPAPRRNTPGVVPWSPPQPNWNAWVNCNIDEGPLAT
VTLEEVSRDLYNAQTRQEQEDQHLQKMMGERSKLPAAESREYILECIRKSPVVLIRGETG
CGKTTQVPQFILDQMIQAGQGALCNIAITQPRRISAVSIAERVAEERSEMLGASVGYSVR
FETVMPRPYGAILYCTVGTLLRKLEGGLRGISHVIVDEIHERDINTDFLLVMLRDMVRAY
PELRVILMSATVDTTLFVDYFGTVTIVEVYGRVHPVQEYYLEDCIQMLNFIPQPNDRKRK
SRDDAPDDDDQEENCNKAVSNEYNQATKAAMAMLPEKEMSFELVEALLKYIQGLGIPGAV
LIFLPGWNLIVTLQRHLQCSPEFGSQKYRILPLHSQIPREEQRKVFEPVPDGITKIILST
NIAETSVTINDVVYVIDSCKLKMKLFTSHNNMTNYATVWASKTNLEQRRGRAGRVRPGFA
FHMCSRARFEKLDQHTTPEIFRTPLHELALSIKLLRLGSISGFLSKAVEPPPIDAVVEAE
ATLRAMHALDSNDELTPLGRILARMPIEPHLGKMIIYGCVFYIGDAMCTIAASSTFPEPF
VTGMDQRRLGWMHKSLAGSRHSDHAALLNAFQMWEEARCGGEQSELNFCEHKSLNMQTLR
MTCEAKNQLRDILVNIGFPEESLLPQPFNFTGPDNRLDVAITLLCLGLYPNVCYHKEKRK
VLTVENKAALVHKSSVNCSNFEIRFPSPFFIFGEKIRTRAVSAKQMTMVSPIQLLLFASR
TVTAQASDMVQLDGWINLQMEVDLAARIMALRPPLEALMIRAAKEPEGIEKPGPQEECLM
AVLRSLSRPNAGRFGLSTEGSGSNYRPPSKFPRMDNDRRGGGFGRGGYGGPSRGGYRDGN
FGSSGRGYGGGGGGGYRGRSFGGSGGSFRGRGGY
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgacatcaagcagtacctgtactcgtggctgggcaagcagaagctgatgcca
gagtatgagttcagcgcagggggtgggccaaaacatcgccagagattcaagtgtgagctg
cgtgtggaggggctggactatgtaggggtgggtaactctaccagcaagaaagacgctcag
gccaacgccgctcgcgactttgtcaacttcctggttcgcgtcggcaaaatggatggcaag
gatattccgagtgctgtgccatcagtaccggagggagggggggacgcatttgggggaggt
cctcgggagcctggatcaacagctctgccaggaggaatgatgatgccacaccagaaactg
ggactggatggggagggatcatccccaggtccgtctggaccgatacgcgagttcccactg
taccagcgaggaccccctcaggaatacctggatcgtatcgcagagaaacgacggctggaa
gaatcagaggatgtggacatgaacgcagaaatccatggcaactggacttgcgagaacgcc
aagagcagactgcaccagttcctgcagaccagtcgcatccagactgactataagtatgcc
gttgtagggcccgatcacaacaggagtttctacgctgagatgggcttctatgtcaagaag
atcaaccaacaaatccacgccagagagcctggatccaacaagcagaccgcctcaaaatcc
tgcgccctgtctctgatacgacagctgtttcacctgggtgccatcgaggctttcaccggc
gtcaagaagaagaaagactccgaaaatttgccagcctacgaggtggcagtgaacccagag
acagtgcagcagatagaccagtgtctgcaggcttggagcatacagcctgtggacaagaac
cggctgacgttcggcgaggtggaagagggccagtctaactcgctgctgatgtgtgaaacg
ctggaagagtttgagccggcaccacgacgcaatacaccgggcgtggtgccctggtcaccg
ccacaacccaattggaacgcttgggtcaactgcaatattgacgagggaccgctggctact
gtaacactggaagaggtgagccgggacctgtacaacgcccagacgagacaggaacaggaa
gaccaacatcttcagaagatgatgggggagagatccaagctgccagcggcggagtccaga
gaatacatcctggagtgcatcaggaaatctcctgtcgttctcatccgtggggagactggc
tgcggtaaaaccactcaggtccctcagttcatcctggaccagatgattcaggcagggcaa
ggtgctctctgcaacatcgccatcacacagcctcggcgtatcagcgccgtatccattgcg
gagcgcgtggcagaggagcgaagtgagatgctgggggcctcggtcgggtacagcgtcagg
ttcgaaaccgtcatgccgcggccgtacggagccatcctctactgcacagttggtacactt
ctacgcaaactggagggaggtctgcgaggcatctctcatgtgattgtggatgaaatccat
gaaagagacatcaacacggactttctgcttgtgatgctgcgagacatggtgcgagcgtac
ccagagcttcgcgtcatcctcatgtcggccacggtggacaccacgctcttcgtcgactac
ttcggcaccgtcaccatcgtcgaggtctacggtcgggtccatcccgtgcaagagtactac
ctggaggactgcattcagatgctcaacttcatcccccagcccaacgaccgcaagcgcaag
tcccgagatgacgctcctgacgacgatgaccaggaggagaactgcaacaaagcggtgagc
aacgagtacaaccaggccaccaaggccgccatggccatgctgccggagaaggagatgtcc
tttgaactggtcgaggcgttgctgaagtacatacagggtctgggaattcctggcgccgtc
ctcatcttcctgccgggctggaacctcatcgtcacgctgcagagacatctgcagtgctca
cctgagtttggaagtcagaagtaccgcatcctgccgctgcattctcagattccccgcgaa
gagcagcgcaaggtctttgagcctgtgcctgacggtatcacaaagatcatcctgtccacc
aacatagcagaaaccagtgtcaccatcaacgatgtggtctatgtcatcgactcctgcaag
ctgaagatgaagctgttcacgtcgcacaacaacatgactaactacgccacagtctgggca
tccaagaccaacctggaacagcggagggggcgagccggtcgtgtgcgccccggatttgcc
ttccacatgtgtagccgcgcacgatttgagaagctggatcagcacacaacgccggagatt
ttccgcacccccctgcacgagctggcgctgtccatcaaactgttgcgtctggggtccatc
tccggcttcctgtccaaagccgtggagccgccgcccattgacgctgtggtggaggctgaa
gccactcttagagccatgcatgcccttgacagcaacgacgagctgactcccctgggacgc
atcctggcgcgcatgcccatcgagcctcacctgggcaagatgatcatctatggctgtgtc
ttctacattggagacgccatgtgcaccatcgcagccagcagcacattcccagaaccgttc
gtcaccggcatggatcagcgacgtctcggttggatgcacaagtctctggcggggtcacgc
cacagcgaccacgcagctctactcaacgctttccagatgtgggaggaagccaggtgtgga
ggcgagcagagtgagctgaacttctgcgagcacaagtcgctcaacatgcagacgctgcgc
atgacatgcgaggccaagaaccagctgagagacattctggtgaacatcggcttccccgag
gagagtctgctgccacagcctttcaactttaccgggcctgacaacagactggatgtggcc
atcacactgctgtgtctgggtctgtaccccaacgtgtgttaccacaaggagaaacgcaaa
gtgctgactgtagagaacaaggccgccctggtccacaagtcctccgtcaactgcagcaac
tttgagatccgcttcccttcaccctttttcatctttggggaaaagattcgaacccgtgca
gtgtcggccaaacagatgacaatggtgtcaccaatccagctcctgctgtttgcctcacgc
actgtcaccgcacaggcctctgacatggtgcagctagacggctggatcaacctacagatg
gaggtggacctagcagcccgcatcatggcgttgagaccgccgctagaagccctgatgatc
cgcgcggccaaggagccggagggcatcgaaaagcccggcccccaggaagagtgtctgatg
gccgtcctgcgctctctgtcccgacccaacgccggcaggtttggactgtctacagagggg
tcaggctccaactaccgaccaccttccaagttcccgcgcatggacaatgaccgtcgcggc
ggtggtttcggtcgagggggttacgggggtcctagccgaggcggatatcgtgacggcaac
ttcggtagcagcgggagaggatatggtggtggtggtggcggtggttaccgcggtcgcagc
ttcggtggcagtggtggcagtttccgtggacgtggtggctactag
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