Littorina saxatilis: 138952831
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Entry
138952831 CDS
T10665
Name
(RefSeq) short transient receptor potential channel 7-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
lsax Littorina saxatilis
Pathway
lsax04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138952831
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsax04040
]
138952831
Ion channels [BR:
lsax04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138952831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
YVC1_C
DUF3734
PKD_channel
Motif
Other DBs
NCBI-GeneID:
138952831
NCBI-ProteinID:
XP_070180667
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All DBs
Position
LG2:complement(36410789..36511987)
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AA seq
1104 aa
AA seq
DB search
MAKTLGSCIMYNSPYSSPSRGLDYATADKRASTMPSQGSLFTNFEDVQLTDEERVFLNAA
FLGDLGIVRQSLEECADSNLSVNCVDYMGRNALHLAIDSEKLDIIEILLDNLSFNCIEEA
LLHAISKGATKIVKIIIEHPNFMAGEDRLRRMGGGEAFFRTEEKSQFPPDITPLILAAHY
NNHEIIQMFLSRNHTIEKPHPISCKCADCVTKQNYDSLKRSRSRLNAYRALASPAYMALS
SPDPIMTTFELRQEMMKLAEVEKEFKSEYLGMVEQCMNFACELMDLCRGTQEVEAVLSDS
GESIDRDPLSRLKMAIRYEEKKFVAHPNCQQHMTSIWYGSEMGFLQSLNGPMQFFYLVLF
IPLIPFLCVVYVFMPGGKIGAIMRCPVTKFITHTTSHMCFLVLLAAATFRITESGVTITD
SDEFNDPRYKSLTKDEKIQSLLKETLRPASTLITHVQICIVFWILGLLWIECKQVYICGA
RSYVTDYYNTMDFGVLSMYLSSYVLRFFTEFKVSEADSYFNGTALAAEFLYKDNFTYFDL
HIANIKSQRMSPHHYFMEASRFQWEPYDPEIVSDALFAIANVISFARTTWLMPAFEVLGP
LQISLGRMIGDITRFMVLFTLVLFAFMVGLHNLYWYYGSQKIKMDLNGTLVSVHAAKAFQ
GLKQTFASLFWSMFSQVSINDIIVTHPSPGGVRHCLALDLERTKIYCTDSNSNDSLLLRF
SLLPVYTDERHSQTESSTSLVETVGMYLFGIYHVVIIIVLINMLIAMMSHSFEDIQTDCD
VEWKFARTKLWLNYMDEGSTLPVPFNMIPTPKSFFYGWQSCKEMFCNAENYMHSAKGKKQ
TFLKQRRETVCKALELKPDETSYSDIMHRLVKRYLFKLERAKDEKEKVKDGHANLGGQDV
EIWDPTQDDGPPPPVPDTPSRIPYATPPIVEEEEHDQEETDRKSGDSKPHPRRTSTGIVP
MATTLAIPQLDAIQRSQKLLDVRLQHLQANNKDYNRMIDDVEFIRKLMAENQKALCNVVQ
ALSNIQGEIVNLAQCLKPSPPKSHPSSATSPASILPNANTHLHHHPSPPLVNAVSSGGRN
NVHTATTVTRGKRGSGPDEDESKV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggccaagactctaggatcatgcattatgtacaactctccctattcctctccctccagg
ggactggactatgccacggcggacaagcgagcgtccactatgcccagccagggctcgctc
ttcacaaacttcgaagatgtccagctcacggacgaggagagggtgttcctcaacgcagcc
ttcctgggcgacctgggcatcgtgcggcagtcccttgaggagtgcgccgactccaacctc
tccgtcaactgcgtcgactacatggggcgcaacgccctccacctcgccatcgactcggag
aagctggacatcatcgagatcctcctcgacaacctcagcttcaactgcatcgaggaggcg
ctgctgcacgccatcagcaagggcgccaccaagatcgtcaagatcatcatcgagcacccc
aacttcatggccggggaggaccggctccggcggatggggggcggggaggcgttcttccgc
acggaggagaagagccagttccccccggacatcaccccgctcatcttggccgcccactac
aacaaccacgagatcattcagatgttcctctccaggaaccacaccatcgagaagccccac
cctatctcgtgtaagtgcgcggactgcgtgaccaagcagaactacgactcgttgaaacgg
tcgcggtcacggttgaacgcttaccgggcgctggcaagtccggcctacatggctctgtcc
agccctgaccccatcatgaccacctttgagttgaggcaggagatgatgaagctggctgag
gtggagaaggaattcaagagtgagtacctgggcatggtggagcagtgtatgaactttgcc
tgcgagctgatggacctgtgccgggggacacaggaggtggaggcagtactcagcgacagc
ggcgagtccattgacagggaccccttgtccaggctcaaaatggccatcagatacgaagag
aaaaagtttgtggcccatccgaactgccagcagcatatgacgagtatctggtacgggtcg
gagatgggtttcttgcagtcgctgaacggtcccatgcagttcttctacctggtgctcttc
attcctctcatccccttcttgtgtgtcgtatacgtcttcatgcccggcggtaagatcggc
gccatcatgcgatgtccagtgaccaagtttatcacgcacacaacgtcacacatgtgtttc
ctggtcctgctggcggccgccacgtttcgcatcactgagagcggcgtgaccatcacggac
tcggatgagttcaacgacccgcgctacaagtcgttgaccaaggacgagaagatccagagc
ttgctgaaggaaacgctgcggcccgccagcacgctcatcacacatgtacagatctgtatt
gtcttctggatattggggttgttgtggatcgagtgcaagcaggtgtacatctgcggagca
cggagttacgtcacagactactacaacaccatggactttggggtcctgtccatgtacctc
tcgtcctatgtgctgaggttcttcacagagtttaaagtgtcagaagcagacagttacttc
aacggcacagccttagcggctgaattcctgtacaaagacaactttacgtactttgacttg
cacatagccaacatcaagtcacagcggatgtcgccgcatcattattttatggaggcttct
cgtttccagtgggagccgtacgatccagaaatcgtgtccgacgcgctgttcgccattgcc
aacgtcatcagcttcgctagaacgacgtggttgatgccagcctttgaggtgctgggtccc
ctgcagatctccctgggtcgcatgatcggggacatcactcgtttcatggtgctcttcaca
ttggtgctgtttgccttcatggtgggtctccacaacctgtactggtactacggctctcag
aaaatcaagatggacctcaacgggactctggtgtccgtccacgctgctaaggcgtttcag
ggcttaaagcagacgttcgccagcctgttctggtcaatgttcagccaagtcagcatcaac
gacatcatcgtcacgcaccccagccccgggggagtgcggcactgtcttgccttggatctg
gaacgtaccaagatttactgcacggattccaactcaaacgattcactgctgttgcgtttc
tctttgctaccagtgtacacagacgagcgtcactctcagacagagagcagcacctcactg
gtggagacggtgggcatgtacctgttcggcatctaccacgtcgtcatcatcatcgtcctc
atcaacatgctcatcgccatgatgagtcattcctttgaggacattcagacggactgtgac
gtggagtggaaattcgcccgtaccaagctgtggttgaactacatggacgagggtagcacg
ctacccgtgcccttcaacatgatccccaccccaaagtccttcttctacgggtggcagtcg
tgcaaagaaatgttctgcaacgcggagaactatatgcactcggctaaaggcaaaaagcag
acgttcctaaaacaacgacgagaaacagtgtgtaaagcactggagttaaagccagacgag
acttcgtactcagacatcatgcatcgtctggtcaaacgatatctcttcaaactggagaga
gccaaggatgagaaagaaaaggtcaaggacggtcacgccaatttgggtggccaggacgtg
gagatctgggatcccacgcaggatgatggccctccgccccccgtgcctgacaccccctcc
cgcattccctacgccacgccccccattgttgaagaggaggagcatgaccaggaggagact
gacagaaagtcaggtgactccaagccccatccacgacggacctccacgggcattgttccc
atggcaacgaccttggccatcccgcagctagacgccatccaaaggtcacagaaacttctg
gacgtgcggttgcagcatctacaggccaacaacaaagactacaatcgaatgattgacgat
gtagagtttatccgaaaactcatggcggaaaatcagaaggcgctgtgcaatgtggtacaa
gcgctgtccaacatccagggcgagattgtcaacctggcgcagtgcctcaaaccctcgccc
cccaagtcacacccctcctccgccacctcccccgcctccatcctccccaacgcaaacacg
cacctccaccaccacccctcgccgccgctggtcaacgcggtgtcatcaggtgggaggaac
aacgtccataccgcgaccacggtgacgcggggcaagagggggtccggtccggatgaggat
gaaagcaaggtctga
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