Littorina saxatilis: 138957246
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Entry
138957246 CDS
T10665
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lsax Littorina saxatilis
Pathway
lsax04120
Ubiquitin mediated proteolysis
lsax04140
Autophagy - animal
lsax04144
Endocytosis
lsax04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138957246
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138957246
04140 Autophagy - animal
138957246
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138957246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138957246
04121 Ubiquitin system [BR:
lsax04121
]
138957246
Enzymes [BR:
lsax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138957246
Membrane trafficking [BR:
lsax04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
138957246
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
138957246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
TRAF3_RING
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
Tfb4
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
138957246
NCBI-ProteinID:
XP_070184495
LinkDB
All DBs
Position
LG2:complement(26285268..26293158)
Genome browser
AA seq
472 aa
AA seq
DB search
MAAYTHRPAHRHSAVQAQEHGYDVELACGELVDNKYICPICLSVMCDAMQTVCGHRFCKS
CITRVAGDRPWGRCPVDKTALRRPEQLFNDVAMRREILSLNIKCRNSNKECTWTGELRDS
ETHLKDCPLESMTCPLGCEKQLLRGQMTMHKEECPKRSIVCGHCKESIVFNKMHKHEVVD
CSRYPVSCTLCGQTGVPRGEIAHHMDSTTGSCPQANVVCKFLSVGCHFQDKRKDMVKHYD
ANTESHLSLLMNQVVKMTVTNDMLRDELCTAKGKLTETSMQIAEHTETMKQLKERTVCGR
LLWKLDLSNMQPLPNMVFSPPFYSSCPGYQMRLRLDFRGVSDGEDVYSSVFLVLQKGEFD
QDLMFPYNGQVMVNLLPQSSNRNVSNRKVSTVIKCKDIPRNITGNTNARVNSRGCTRFLK
QKELLSPVYNKNNVLYFDLSVVNPSENDGNQNSGSVPPASNILVSPLSPVSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttacactcacaggcccgctcaccgtcattcagcagttcaagcccaagaacat
ggctacgatgtggagcttgcatgtggtgagcttgtagacaacaagtacatctgtcccatc
tgcctgagtgtgatgtgtgatgccatgcagactgtctgtggccaccgcttctgcaaatcc
tgcatcaccagagttgctggagaccgaccctggggacgttgccctgtggataagacagca
cttcgtaggccagaacagcttttcaatgatgttgctatgcgtcgtgaaatcttgtcattg
aacatcaagtgcagaaacagcaacaaggaatgcacatggacaggggagctcagagattct
gagacccatttgaaagactgtcctttggagagcatgacctgtccacttgggtgtgaaaaa
cagttgctgcgtggtcagatgacaatgcacaaggaagagtgtccaaagagatccattgtt
tgtgggcactgtaaagagagcattgtcttcaacaagatgcataaacacgaggtggtggac
tgctcaaggtatccagtttcctgtactctatgtggacaaacgggggtacctcgaggtgaa
atcgctcaccacatggattcaaccacaggctcgtgcccacaagctaatgttgtttgcaaa
ttcctttctgtgggctgccactttcaggacaaacgcaaagacatggtgaagcactacgat
gcgaacacggagtctcacttgtccctgctgatgaatcaagttgtaaaaatgacagtgacc
aatgacatgctgcgtgatgaactctgcacagctaagggaaaacttacagaaaccagcatg
cagattgctgaacacacggagacaatgaaacagctgaaggagagaaccgtctgtgggcgt
ctgctgtggaaactggacttgagcaacatgcagcctctacccaacatggtcttcagccct
cccttctactcttcgtgccctggttaccagatgcgactgagactggatttccgtggagtg
agcgatggagaagatgtctactcttcagtgttccttgtccttcagaagggagaatttgat
caggacctcatgttcccttacaacggacaggttatggtgaacctgctgccacagagcagc
aaccgcaatgtttccaatcgcaaggtgtcaactgtcatcaagtgcaaggacattcctcgc
aacatcacgggcaacaccaacgctcgcgtcaacagtcgtggttgtacgcgcttcttgaaa
cagaaagagcttctgtccccggtgtacaacaaaaacaatgtgctgtactttgatctgagt
gttgtcaaccccagcgagaatgacggaaaccagaatagcggcagtgtaccaccagcctcg
aacatcctggtctcacccctctccccggtctccagttga
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