Littorina saxatilis: 138967592
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Entry
138967592 CDS
T10665
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lsax Littorina saxatilis
Pathway
lsax03450
Non-homologous end-joining
Brite
Enzymes [BR:
lsax01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138967592
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
138967592
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138967592
NCBI-ProteinID:
XP_070196291
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Position
LG5:complement(59891697..59915351)
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AA seq
923 aa
AA seq
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MTDASTDSDKVVAAKVPFAELCGLLEKLSKTQGNDKKKRVLGDFVDSWRRLHNETHTDDA
DTTTDSFYPAMRLLLPHLERERVAYGIKETGLARLMIKVLCLGKDSPDAQRLLNYRAVKT
ARGDAGDFASMAYFVLKPRCPQRGTLTIQQVNDTLDAIASNNAAKKKSAVEDSILYLLKN
LSALEQKWLVRMIVKELKVGLSQASVLSVYHQDAEDLFNVNNNLEKVCRLLRDPATRMHE
IGVSVFSPFTPMLGDRAAPDKIEKIMEGRPYFIETKLDGERVLLHKKGDEYKYFSRSGNE
YTNVFGATPFDGTLTPYIANCFKPDVDTCIIDGEMLGYHAASKTFGTKGEQFDIKSPNVA
EAKGYQPCVMVFDVLLYNDRVLTNLPLRERLTYLDKVVTPVEGRIQLSEHKEAHSNQDCV
EALNDAIDGREEGIMVKDPETPYRPNVRKGGWFKIKPEYIGGLMDELDLLILGGFFGEGH
RGGMMSHFLCGVAVPTEDGSEPKVFHSFCKVGSGYTKKQLAEFNQRMADHWQAFDKRRPP
QCIQLASGFKEKPDAWIEPDKSCIVQVKAAEIIASERFKVGCTLRFPRVEMIRDDKPWHQ
CMTTADIEDLRQKSGGKLTGGRMELGEDGEGEGAPTKKKRRIVQRAVQPQLMSRFRGADV
SDVEQVSQVLSGKEVCVINGPADLTKQQIERKVKEMGGEFVQNPGSSTTFVLAEKVAVKV
ANLIKTDKYDIVKVTWFRRVLDAGHWIPWTPGDMIHTSPATRKQFQQDYDQYGDSFTEDV
TEEQLKHIFSTMGKEGQGVATVTAEEIAELEEEYFPDESPYGLFRTCRIYMDSNLVIGDD
STHLPTSTLDLLALEIRFFGATLANELDEQVSHVIVDQKDLSRLEELKAVRRGRKKKFHI
VTEKWVRACMEEGGLYPEKTFEL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgtccacggacagtgataaggtggtggcagctaaagtcccgtttgcagag
ttgtgtggattgcttgagaagctgtccaaaacacaaggcaacgacaagaagaagcgagta
cttggagactttgtggacagctggcgacgtctgcacaatgaaacgcacactgatgatgct
gacaccacaacagactcgttctacccagcaatgagactgttgctgccacaccttgaaaga
gaacgagtggcatacggaattaaagagactggcttagcgcggttgatgataaaagtgttg
tgccttggcaaggacagtcctgacgcacagcgactgctcaactaccgggccgtcaaaaca
gctcgtggggatgcgggtgactttgccagcatggcatactttgtgctgaaacctcgctgc
cctcagcgtggcaccctgaccatccagcaggtgaacgacaccctggatgccatcgcctca
aacaatgctgccaagaaaaagtcggctgtggaagacagcatcctctacttgctgaagaat
ctgtcggctctggagcagaaatggctggttcgcatgattgtcaaggaactgaaagttggt
ctgagccaggcgtcagtgctgtcggtttaccaccaagatgctgaggacttgttcaatgtc
aacaataacctggaaaaggtgtgtcgtctgctccgagatcctgccacacgcatgcatgag
attggcgtgtctgttttctcccctttcacacccatgttgggcgaccgagcagctcctgat
aagatagagaagatcatggagggacgtccgtacttcattgagaccaagcttgacggtgag
agggtgttgctgcacaagaagggggatgagtacaagtacttttcacgcagtggcaacgag
tacaccaatgtgtttggtgccacgccgtttgacggaactctgaccccgtacatcgccaac
tgcttcaagccggacgtggacacctgtatcatcgatggggagatgctgggataccacgct
gcatccaaaacttttggcaccaagggggaacaattcgacatcaagtcacctaacgtggcc
gaggccaaaggttatcagccttgtgtgatggtgtttgacgtgctgctgtacaacgaccgc
gtgctaacgaatctgccgctgcgtgagcgcttgacgtacctggacaaagtcgttacacct
gttgaggggaggatacagctgagtgagcacaaggaggctcattcaaaccaggattgtgtc
gaagcgctgaatgacgccatcgatggccgagaagaaggcattatggttaaggaccctgag
actccgtaccgaccaaacgtgcgtaaagggggctggttcaagatcaaaccagaatacatc
ggaggcctcatggatgagttggatcttctcatcctaggcggcttcttcggtgagggtcac
cgtggtggcatgatgtcgcatttcctgtgtggcgttgccgtgccaactgaagacggcagt
gaacctaaagtgtttcactcattttgcaaggtagggtcagggtacaccaagaaacagctg
gcggagttcaaccagcgaatggccgaccactggcaggcgtttgacaagcgacggcccccc
cagtgcatccagctggcatcaggcttcaaagaaaaacccgacgcttggattgaacctgac
aaatcttgtattgttcaggtgaaagctgccgagattattgcgagtgagcgattcaaggtg
ggctgcactctgcgattccctcgcgtggagatgatccgtgacgacaaaccctggcaccag
tgcatgaccaccgctgatatcgaggacctcaggcagaaatccggcggcaaactaacaggg
ggccgcatggaactgggagaggacggagagggggagggggcgcccaccaagaagaaacgc
cgcattgtgcagcgagcagtgcagcctcagctcatgtctcgattcagaggggctgacgtc
tccgatgtggaacaggtatctcaggtgctgtcaggcaaagaggtgtgcgtgatcaacggc
cccgcagacctgaccaagcagcagatagagaggaaagtgaaggagatggggggagagttt
gtacagaatcctgggagctcaaccactttcgtgctggcggagaaagtggcggtaaaggtc
gccaatctgattaagacagacaagtacgacattgtcaaagtcacttggttccgcagagtg
ctggatgctggtcactggattccatggactcctggtgatatgattcacacctcaccggcc
acacgcaaacagttccagcaggactatgatcaatacggcgacagcttcacggaagatgtg
acggaagagcagctcaaacatatcttcagtactatgggcaaggaggggcagggagtggcg
acagtgacggcggaggaaatagcagagctggaagaggagtatttccctgatgaatcgcct
tatggactctttcgcacttgcaggatatacatggattcgaacctggtgattggcgatgac
agcacacacctccccacctccactctggacctcctggccctggaaatacgtttctttggc
gccacgctggctaatgagctggacgaacaggtgtcccatgtcatcgtcgatcaaaaagac
ctaagccgactggaagagctgaaagcggtgaggcgcggcaggaagaagaaattccacatc
gtcacagagaagtgggtccgggcatgcatggaggagggcggcttgtacccagaaaagacc
tttgaactctga
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