Littorina saxatilis: 138971126
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Entry
138971126 CDS
T10665
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lsax Littorina saxatilis
Pathway
lsax04120
Ubiquitin mediated proteolysis
lsax04140
Autophagy - animal
lsax04144
Endocytosis
lsax04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138971126
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138971126
04140 Autophagy - animal
138971126
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138971126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138971126
04121 Ubiquitin system [BR:
lsax04121
]
138971126
Enzymes [BR:
lsax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138971126
Membrane trafficking [BR:
lsax04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
138971126
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
138971126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
TRAF3_RING
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
CEP104_ZnF
zf-TRAF_2
U-box
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-rbx1
zf-RING_6
Sina_ZnF
DUF5795
Motif
Other DBs
NCBI-GeneID:
138971126
NCBI-ProteinID:
XP_070199854
LinkDB
All DBs
Position
LG7:30035001..30067368
Genome browser
AA seq
609 aa
AA seq
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MAEPPSMDPSMMNPSGVYDSSSGSDGSYPFDTKVEGYDFEFEPPADSRYECAICLFVLRE
PRQTPCGHRFCKNCILRWIRGSHQPARCPVDNEEILESDLFPDNFARREIQNFNARCPNS
KQGCDVITTVKELPAHQNECPLALVPCPNRCSNVLLRRDLEEHVKSACDRRSVQCPDCSN
DFIALEFETHVQSCPKGQVKCQLCEEEVTREVLPTHEEDLCPQKIITCTFGVLGCNIKIE
RCTMEDHLRDSMSDHMVMLCQGLTRIFHFLNMDPLSRDMTTFPSRNLSPTEMSGAMTSMA
HHLTSVEAGLSLRSSPVLQGGPLSFPSHMLKTPVPASTSLDSSSRRLHGQSSQLRRSPSD
PKYLMSGATSTGTLEAQVLNYASGALSDAEGGNMSGHSLRMDSSSKSSYSTMHDEQKLVL
HEQRLLELQAKVDSYKLKMRAQEQQLNEMEGRICNGEFFWKIRNYSKYQREAEKGETTAL
HSLPFYTSPSGGYKLCVRANLNGVDSARGSHLSLFIHFMQGEYDDVLEWPFGGRIILSVM
DQNDCCELRNHVAETLAAKPNLAAFQRPTTPRNHKGFGYMEFLPLSALKNSSYIKNDTLI
IKAHVLPSG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcctccatccatggacccttcgatgatgaacccctcaggggtctacgattca
tcatcagggagcgatggaagctaccccttcgacaccaaggtggaggggtatgacttcgag
ttcgagcctcctgcagactcacgttatgagtgtgccatttgtctgtttgtgctgcgagaa
ccacgacagacaccctgtgggcatcgcttctgcaagaactgtatactgcggtggattagg
ggctctcatcagcctgcaagatgtccggtcgacaacgaagaaattttagaatccgacttg
tttccagacaatttcgcaaggcgagagattcagaacttcaacgccaggtgtcccaatagc
aaacaaggctgtgatgtgataacgacagtcaaagaattacctgctcaccagaatgaatgt
ccattagctctagtcccgtgtccaaacagatgttccaacgtgttgctacgaagagacctc
gaggaacatgtcaaaagcgcctgtgatcgccgcagtgtacagtgcccagattgtagcaac
gatttcatcgccttggaatttgagacacatgtacagtcatgtcctaagggtcaagtcaaa
tgtcagctttgtgaggaggaagtaacgagagaagtgcttccaactcatgaagaggaccta
tgcccccaaaaaatcatcacatgtacctttggtgttttaggatgcaatataaagattgag
cgctgcacgatggaggaccatttacgagacagcatgtcagatcacatggttatgctgtgc
caagggctcacgcgaatcttccactttcttaacatggaccccttgtcacgagacatgacg
acgttcccgtcacgaaacctctcgcccacggagatgtccggggccatgaccagtatggca
catcacttgacctctgtggaagcagggctgtcgctcaggtcttctcccgtacttcaggga
ggcccactctcctttccatcccacatgctgaaaacaccggtccctgcctccacctccctc
gactcttcctcaaggaggctccacggccaatcatcacagcttcgccgctcaccctctgac
cccaaatacctcatgtccggagccacctccacaggaaccctggaagctcaggtcttaaac
tacgcgtcgggagcactgtcggacgcagaaggcggcaacatgtctggtcattccctgagg
atggattcgtcgtccaagtccagttacagtacgatgcatgacgaacagaagctggtgcta
catgaacagaggctgttggagctgcaggctaaggtcgacagctacaaactgaagatgcgg
gcacaggagcagcagctgaacgaaatggagggacggatctgcaacggagagtttttctgg
aaaatacgaaactactccaagtaccagcgtgaggctgaaaagggagaaacaacggctctg
cacagcctgccgttctacacctctccttccggaggttataaactctgtgtgcgggccaac
ttgaacggtgtcgactcagccagagggagccacctgtcgctgttcattcacttcatgcag
ggcgagtacgacgatgtactggaatggccgttcggcggccgaataatcctgtctgttatg
gatcaaaatgactgttgtgaactcaggaatcatgtggcggaaacgcttgccgcaaaacca
aacttggcagcctttcaaaggccaaccactcccaggaatcacaaaggttttggttatatg
gagttcctgccccttagtgcgttgaaaaactcgtcttacatcaagaacgatacgcttatc
atcaaagcacacgtactgccaagtggatga
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