Littorina saxatilis: 138976811
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Entry
138976811 CDS
T10665
Name
(RefSeq) telomerase-binding protein EST1A-like isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
lsax Littorina saxatilis
Pathway
lsax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138976811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138976811
03032 DNA replication proteins [BR:
lsax03032
]
138976811
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138976811
mRNA cycle factors
Common to processing body (P body) and stress granule
138976811
DNA replication proteins [BR:
lsax03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
138976811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
TPR_2
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-GeneID:
138976811
NCBI-ProteinID:
XP_070205807
LinkDB
All DBs
Position
LG9:complement(64801581..64834650)
Genome browser
AA seq
1115 aa
AA seq
DB search
MQPAGDSEARPHSRGQHNDNRKAQPQPHPQPQSKQQQQYNSRSQGSNHSKDSYSQHANYP
RMASSPGTVPDPLPSTSHSGGLIKLPSDSPSDRPQYSHHSHGQGRGQGHRQERVPAHGQD
WNQGYGQEWGQGYSQEHTEDRFRRNSQGQGPGQGHPERRLYDPKNPTKPIMVPDSRPLKF
QETEDMHSPSPQESFTPPPLTHSPGPSGSPGVGPAFPPFFPPHPGYMYPLPHMRMPFPGY
PHGPPPPPNHPMFYGFQPPVRPPVDADDAYYNRELEQVVSGMSRQQCRMMAEQVLRDTAP
LDSQLTNILSRGQLSDDAQRRVRQLRQELQRRYERVLLLDMDVANQRGVEQLLWRSVYYN
IIESLRRQQTPDNGSYAATAKQAMADILDEGTLFYENLLTKLETTYSFSLDLLAEEGSSR
MEGVGRGVRLAVLSAQRTMMFLGDIARYREQAMQSTNYGKARQWYMKAQKLAPKNGRPYN
QLAILAMYTRRKLDAVYFYQRSLAASNPILTARESLMSIFDEVRRKEEAVEQKRVEELRR
RRRRKATPSHSQPRVELWIAPDGSSSRDHQSDRESDNDDLSSLSSIELNKRFVLTFLNVH
GKLFTKINFEVFVESGSLMLQEWRLLLQHSPTMLTATRLVQISAINMFSIDNTALKDESL
EASCRSLLQEHAVEVGLDMFGLLVAHVNDLLTSHLAATSSGSTSHLPLSDDLQQLLPGVK
VWVDWMMCHSLLWNPQPSLRPPDIGPQVDVWKNVAQLCNTLKQLNTSHVTLHRDTREGCE
ALALMEDCMLSGFVPLLSAPVDTVYVSTCQDKEVAVDCLRLEKVVLFGEYLCGIEPPMLS
FDVAKGRYYSVAPAPVKSEDTLVDTDTDAGFETEDVIVESEESGEDGDETPGGTIKELKA
RKAELRQRVESQARDKHTIQTMLEESCPAKLELEVRPRFLVTDTNCFIDHLSSLRSVVAT
ETYTLVVPLVVLNELEGLAKGAGQKTGRSHDDSPEHITMVTRHANQALTYLETEFKAKNC
HLRVQTSKGSILETLAFRSEESDNSGNNDDLILSCCLHYCKDMARDFMPKDKDSPVRLFR
DVVLLTDDRNLRLKAHTSNVPVKDVPAFCRWCKVT
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgcaggggacagcgaggccagacctcacagccgcggccagcacaatgacaac
aggaaggcccaaccgcaaccccacccccagccacagtccaagcagcagcaacagtacaac
tcacgatctcaaggcagcaaccacagcaaagactcttacagccagcacgcaaactaccct
cgcatggcctcgtcaccaggcaccgtccctgaccctttaccctccacctctcactccggt
ggtctcatcaaactgccgtccgactcaccttcagaccgaccccagtactcccaccacagt
catggtcaaggtcgtggccaaggtcacagacaagaacgtgtcccggctcacggccaggac
tggaaccagggttacgggcaggagtggggacagggctacagtcaggaacacacagaggac
aggttccgtcggaactcgcaaggtcaaggcccgggtcaaggtcaccctgagcggcggctg
tatgaccccaagaaccccactaagcctatcatggtgccggactctcgcccgctcaagttc
caggagacggaggacatgcactccccctccccccaggagagcttcaccccgccccccctc
acccacagtcccggtccctccgggtccccgggggtggggccagcgttcccccccttcttt
ccgccccacccgggctacatgtaccccctacctcacatgcgcatgcctttccccgggtac
ccccatggcccgccccctccccccaaccaccccatgttttacgggtttcagcctccagtt
cgcccgcctgtggatgctgatgatgcctactacaacagagagttggagcaggtggtgtcg
ggcatgtccagacagcagtgccgcatgatggccgaacaggtgttgcgagacacggcccca
ctggactctcagctgaccaacatcttgtctcgcggtcagctcagcgacgacgctcagcgc
agggtcagacagctcagacaagagttacagcgtcgctacgagcgagtgttactgctggac
atggacgtagccaatcagcgaggagtggagcagttgctatggcgatctgtgtactacaac
atcatcgagagcctgcgacgacagcagacacctgacaacggcagctacgcagcgacagcc
aaacaggccatggctgacattctggatgagggcacgttgttttacgagaacctgctgacc
aagctggagacgacgtactcgttcagccttgacttgctggcggaggaggggtcttcacgc
atggagggggtggggaggggggtgcgtctggcagtactaagcgctcagcgcaccatgatg
ttcctgggcgacatcgcacgctacagggaacaagccatgcagtcaaccaactacggcaag
gccaggcaatggtacatgaaagctcagaagctggctccaaagaacggtcgaccttacaac
cagctggccatacttgccatgtatacgcgtcggaaacttgatgcagtgtacttctaccag
agaagcctggctgctagcaaccccatcctgactgccagggagagcctcatgtcgatcttt
gacgaagttcgcaggaaggaagaagctgtggagcagaaacgtgtggaggagttgcgacgg
agacggcggaggaaagccacgccctcccactcacagccgcgggtagagctgtggatcgcg
ccagacggatccagctctcgtgaccaccagtctgaccgggagtccgacaacgacgatctc
agcagtctctcgtccattgagctgaacaagagattcgtgctgacatttctcaacgttcat
ggaaagctctttaccaaaatcaactttgaggtgtttgtggagagcgggagcctgatgcta
caggagtggcgcctattgttgcaacactcacccaccatgctgacggccactcgactggtg
cagatctcagccatcaacatgttctccattgacaataccgcgctcaaagacgaaagcctg
gaggccagctgtcgctccttactacaggaacacgcggtggaggtcggccttgacatgttc
ggcctcctcgtcgcccacgtcaacgaccttttgacctctcaccttgctgccacttcctct
gggtcgacctcacaccttccccttagcgacgaccttcagcagctgttgccgggcgtgaag
gtgtgggtggactggatgatgtgtcactcattgctgtggaacccgcagccctccctcagg
ccgcccgatattgggccccaggtggacgtgtggaagaatgtggcccagctgtgcaacacg
ctcaaacaactcaacaccagtcacgtcacgctgcatcgcgacacgcgggaagggtgtgaa
gccctggcactgatggaggactgcatgctgtcaggattcgtcccactcctcagcgccccg
gtcgacacagtctacgtcagcacgtgtcaggacaaggaggtggcagtggactgcctgcga
ctggagaaggtggtgttgttcggagagtacctgtgtgggattgagccgcccatgctgtcc
ttcgacgtggcaaaggggcgctactactccgtggctccggctcccgtcaagtctgaggat
acactggtcgacaccgacacagatgcgggctttgagacggaggacgttatcgtggagagc
gaggagtcgggggaggacggagacgagacgccaggggggacaatcaaggagctgaaggcc
aggaaagccgagctgagacagagagtggagagccaggccagagacaaacacaccatacag
accatgctggaggagagctgtccggccaaactggagctggaggttcgaccccgcttcctg
gtgaccgacactaactgtttcatcgaccatctgtcctccctccgctccgtcgtcgccacg
gaaacatacacgctcgtcgttcccctcgttgttttgaatgagctggagggccttgccaag
ggagccggtcagaagacaggtcgtagccatgacgacagccctgaacacatcaccatggtg
acgcgccacgccaaccaggccttgacctacttggagacagagttcaaggccaaaaactgt
caccttcgagtgcagacatccaaaggctcaatcctagagacactggcatttcgcagcgaa
gagtcggataattctggtaacaatgatgatctcatcctgtcgtgctgtctgcactactgc
aaggacatggcgcgggacttcatgcccaaagacaaagattctcctgtacgtctgttccga
gacgtcgttcttctgaccgacgatcgtaaccttcgtctcaaggcccacacctcaaacgtt
ccggtgaaggacgtaccagctttctgtcgctggtgcaaggtcacctga
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