Littorina saxatilis: 138982766
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Entry
138982766 CDS
T10665
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138982766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138982766
Spliceosome [BR:
lsax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138982766
Complex C
U5 SnRNP specific factors
138982766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
Roc
Motif
Other DBs
NCBI-GeneID:
138982766
NCBI-ProteinID:
XP_070212190
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All DBs
Position
LG12:complement(75109300..75204145)
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AA seq
974 aa
AA seq
DB search
MDQDLYDEFGNYIGPELDSDDDDGDDDDNQDDDDFMDRDDDDEDMDQDDREETSEMAVVL
HEDKKYYPTAEEVYGPDVETLVQEEDTQPLTEPIIAPVKKKKFAMAEQDLPITTYDMEFL
ADLMDTPELIRNVTLCGHLHHGKTSFVDCLMEQTHPEIEGAYDTDMRYADILFTEQERGV
SIKATPVTLVLPDTRNKSFLVNIFDAPGHVNFSDEVTAAFRVSDGAVIFVDAAEGVMLNT
ERLIKHALQERLSIVLCINKIDRLILELKLPPTDAYFKVRHIVDEVNAIVSMYAEDETSS
VMSPIIGNVCFASSYYRFCFTLRSFAHIYADTFGDVDEKKFAQRLWGDVYFNNKTRKFSK
KPSPSSPQRSFVEFILEPMYKIFAQVVGDVDECLPSVCEELGIHLTKEEMKLNIRPLMRL
VCRRFFGDFTGFVDMCEEFIQSPVSNAQKKVEHTYTGPSDTDLAEELSKCQADGPLVIHT
CKLYPTEDGTSFHVFGRVMNGTLHANQEVRILGENYTLQDEEDSRFGQVGRLWISEARYK
VEVNRVSAGNWILMEGIDHPIVKTSTILDMTPHEEVYIFRPLKFNTGSVMKIAVEPVNPS
ELPKMLDGLRKVNKSYPLLTTKVEESGEHIVLGTGELYLDCVMHDLRKMYSEIDIKVADP
VVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEAVQISWPRKKLGEFF
QTKYEWDILAARSIWAFGPDATGPNILVDDTLPSEVDKNLLSGVKDSIVQGFQWATREGP
LCDEPIRNVKFKLLDAAIAGEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYCFVEVIA
PADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAFCL
SVFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPML
LELAKQDVMLNYPM
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatttgtacgatgagtttggaaattacattggccctgagctggacagtgat
gatgatgatggagatgatgatgacaaccaagatgatgatgacttcatggacagagatgat
gacgacgaagacatggaccaggatgacagggaggagacatcggagatggcggtggtgctg
catgaagacaagaaatactatcctacggcagaagaagtgtatgggccagacgtggagaca
cttgttcaagaagaagacacacagcctctcacagaacccattattgcaccggtgaagaag
aaaaagtttgcaatggctgaacaggacctgcctatcaccacttacgacatggagttcctg
gcagatttgatggacactcctgagctgattaggaatgtcactctctgtggacatttacac
catgggaagacttcgtttgtggactgcttgatggaacagactcacccagaaattgaagga
gcctatgacacagatatgcggtacgcagacattctgtttacagagcaagagagaggtgtg
agcatcaaggctacccctgtgacccttgtcctgcccgacactcgcaacaagtccttcctg
gtcaacatctttgatgcacccggtcatgtcaatttctcggatgaggtgacggctgccttc
cgtgtctctgatggtgctgtcatctttgtggatgctgcagaaggggtgatgctgaataca
gagagactgatcaaacacgctctgcaagaaaggttgtccatcgtgctgtgcatcaacaag
attgaccgtctgatcctggagctgaaacttccgccaacagatgcctacttcaaggtgcga
cacatcgtggacgaagtcaacgccatcgtcagcatgtatgcagaagatgagacttcctcg
gtcatgtctccgatcattggcaacgtgtgttttgccagctcctactaccgcttctgtttc
acactgcgctcctttgcccacatctatgcagacacatttggtgatgttgacgagaagaag
tttgcacagaggctgtggggagatgtctacttcaacaacaaaacacgaaagttcagcaaa
aagccttccccaagttccccgcaaaggtcctttgtcgagttcatcctcgagccaatgtac
aagatttttgcgcaggtggttggcgatgtggacgagtgtctgcccagtgtgtgtgaagag
ctggggatccacctgaccaaagaggaaatgaagctcaacatcagaccgctaatgaggctt
gtgtgccgccgcttctttggcgactttactgggtttgttgacatgtgtgaggagttcata
caatccccggtgagcaacgcacagaagaaggtggaacacacgtacactgggccctccgac
acagatctagctgaggagctttccaagtgtcaggctgatggtccccttgttatccacacc
tgcaagctgtaccccacagaagacggcaccagtttccacgtgtttggccgagtgatgaac
ggcacactgcatgccaaccaggaggttcgaatcctgggtgagaactacacactgcaggat
gaagaagactcacgctttggccaggtgggccgcttgtggatcagtgaggccaggtacaag
gtggaggtgaacagggtgtctgcgggtaactggatcctgatggaaggcatcgaccatccc
atcgtcaagacttccaccattctcgacatgactccacatgaagaggtgtacattttccgg
ccgctcaagttcaacacagggtcagtgatgaagattgccgtggaaccggtcaacccgtcc
gagctgcccaaaatgttggatggcctgcgcaaagtcaacaagagttaccctctcctcacc
acaaaggtggaggagtctggagaacacattgtgctgggaacaggggagttgtacctggac
tgtgtcatgcatgatctgcgcaaaatgtactcggaaattgacatcaaggtggctgaccct
gtggtgtctttctgtgagactgtggtggagacttcttccctcaagtgctttgctgaaaca
cccaacaaaaagaacaagttgacaatgattgctgagccactggagaaaggccttgctgag
gacattgagaacgaagctgtgcagatctcgtggcctcgcaaaaagctgggagagttcttc
cagaccaagtacgagtgggatattctggccgctcggtccatctgggcttttggaccggac
gcaactggacccaacatcctggtggacgacacactgccctctgaggtggataagaacttg
ctgagcggagtgaaggacagcattgtgcagggattccagtgggccaccagggagggacct
ctctgtgacgaaccaattcgcaatgtgaagttcaagctgctggatgcggctatcgcagga
gaacccattcatcgtggtggtggtcagatcattcccacagcacgtcgtgtcgcctactct
gctttcctcatggccacaccccgtatgatggagccgtactgttttgtggaggtgatagcg
cctgctgactgtgtgtcggccgtctacactgtgctcgccaagaggagaggtcacgtgact
caggatgccccagtgcccggatcaccgctgtacaccatcaaggctttcctgcccgccatc
gactcctttggctttgagacagacctacgcacacacacacagggacaggccttctgcctc
tccgtcttccatcactggcagatcgttcccggtgaccctctggacaagagcatcatcatc
cgtcccctagagccccagcccgccacccacctggcccgggagttcatgatcaagacgcgg
cgacgcaagggtctgagcgaggacgtgagcatcaacaagttcttcgacgaccccatgttg
ctggagctggccaagcaagatgtcatgctcaactatcccatgtag
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