Lacticaseibacillus styriensis: LACSTY_001457
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Entry
LACSTY_001457 CDS
T10276
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lsb Lacticaseibacillus styriensis
Pathway
lsb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LACSTY_001457 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsb03400
]
LACSTY_001457 (nth)
Enzymes [BR:
lsb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LACSTY_001457 (nth)
DNA repair and recombination proteins [BR:
lsb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LACSTY_001457 (nth)
Prokaryotic type
LACSTY_001457 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WLV82177
LinkDB
All DBs
Position
complement(1519647..1520300)
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AA seq
217 aa
AA seq
DB search
MTDAEARQLFNQIMALYPDPEPTLHATNPFEILVAVMLSAQTTDVAVNAVTPALFAAYPT
PEAMAAAPVTDIAEKISRLGLYRTKAAHLKALSAILVQSYGGKVPADAADLVKLPGVGKK
TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPVQIQKRLEALMPKSTWIKLHRSL
IRFGREHLRARDPKIPAGSEWSFLAQHYAPLKEAAKH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcagaggctaggcaattgtttaaccaaatcatggcactatatcctgatccc
gaaccgacgttacacgcgacaaatccctttgaaattctggtagcggtgatgctgtcggcg
caaacgacagatgttgccgtcaatgctgtcaccccggcattgtttgcggcttatccaact
ccggaagcaatggccgctgcgccggtgacggatattgccgaaaaaatcagccgactcggg
ttgtaccggacgaaagcagcccacttaaaggcattaagtgccattttggttcagtcatat
ggcggtaaggttccggctgacgcagctgatttggttaagctgccaggggtcggcaagaaa
acggcgacggtcgtacttagcgatgcgttcggcattccgggcgtggccgtcgatacacat
gtcagtcggattgtgaaggggttgggattagtttcgcctaaggccacaccagttcagatt
cagaagcgactggaagcattaatgccgaagtctacctggatcaagttgcaccgcagcttg
attcgttttggtcgcgagcatttacgcgcccgcgacccaaaaataccggccggttccgaa
tggtcatttttagcacagcattacgcgccgcttaaggaggcagctaagcattga
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