Leptodesmis sichuanensis: KIK02_05605
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Entry
KIK02_05605 CDS
T07779
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc01501
beta-Lactam resistance
lsc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KIK02_05605
01503 Cationic antimicrobial peptide (CAMP) resistance
KIK02_05605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsc03036
]
KIK02_05605
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsc02000
]
KIK02_05605
01504 Antimicrobial resistance genes [BR:
lsc01504
]
KIK02_05605
Chromosome and associated proteins [BR:
lsc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KIK02_05605
Transporters [BR:
lsc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KIK02_05605
Antimicrobial resistance genes [BR:
lsc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KIK02_05605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_YBHG
YknX_C
HH_CzcB
BSH_CusB
Beta-barrel_RND_2
Biotin_lipoyl
RND-MFP_C
HH_MFP_RND
BSH_YknX
CzcB_C
BSH_CzcB
E2R135
DUF2564
FPP
HH_EMRA
ADH_N_2
TP096X_C
Motif
Other DBs
NCBI-ProteinID:
UIE39070
LinkDB
All DBs
Position
complement(1169890..1171107)
Genome browser
AA seq
405 aa
AA seq
DB search
MPLVSCQQQAPQATAPTAVPVRLKVLETSDVAESSEYVGRLESVERVELRPETQGRIAEV
RVRAGDRVAQGATILTIQPAQTAPQLEGAQAAVSAAQANRNVAVQQLRNAEKGAEIARSE
LASAQASQKLAKTNFDRAQFLLSQGAIGKFDYDRARTEMEVSGNRVRSAQERVGQAEVAI
KQAQAAVGQAEAGVRQAQSQVSAAEVNVGFKQVTAPIAGVIGEIFVKPGDLVSSAQTITN
IIQNDALELRMSVPANRLSQLRTGLTVELIDPNSRDRISTGQVSFISPSVDQAAQAVLVK
AVFPNSNDKLRNGQSVEGRIIWDRGTGLLIPTTAVLQMSGKSFAYVAETDKSDGKEQKVA
RMRPVELGDIQQQSYQVLNGLKPGESLIVSGILRLRDGVPIKPET
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgccgctagtatcctgccagcaacaggcacctcaagccaccgcgccaaccgccgtaccc
gtcaggttaaaagtcttagaaacgagtgatgtggccgagagttccgagtatgtggggcgg
ctggaatcggtggaacgggttgaactgcgaccggagactcagggccgtattgccgaagtg
cgggtgcgagcgggcgatcgcgtcgctcagggagccaccatcctcacgattcaaccggcc
cagacagcaccccagttggaaggtgcccaggcggcggtgagtgcggcccaggccaaccgg
aatgtggcggtgcaacaactgcggaatgctgaaaaaggtgctgaaatcgcccgcagtgaa
ctggccagcgctcaggccagtcagaagttagcgaaaaccaacttcgatcgcgcccaattt
ctgctcagtcagggggcgatcggcaagtttgactatgatcgcgcccgcaccgaaatggaa
gtcagtggtaatcgagtgcgatcggctcaggaacgagttggacaggcagaagttgcgatt
aagcaagcccaggccgcggtgggtcaggctgaggccggagtgcggcaggcccaatctcag
gtatcagcggcggaagtgaacgtcgggtttaagcaggtgacggcaccgattgctggggtg
attggcgaaatctttgttaagccgggggatctggtatccagtgctcagacgattaccaac
attattcagaatgatgctctggagttacggatgtcggttcccgcgaatcgcctgagccag
ttgcggacggggttaaccgtagaattgattgatcccaatagccgcgatcgcatcagtact
ggacaggtgagtttcatttcaccctcggttgaccaagcggctcaggcggtgctggtcaaa
gcggtgttcccgaatagcaacgataagttgcgcaatggccaatccgtagaaggccgcatt
atctgggatcgcggtaccggactgttgattcccaccacggcggtgttgcagatgagcggc
aagagttttgcctacgtcgccgaaacggacaaatctgacggcaaagagcagaaggtagct
cgtatgcgtcctgtggagttaggagacatccagcagcaaagctatcaggtcttgaatggt
ttaaaacctggagaatccctgatcgtatcgggcattttacggctccgcgacggtgtgccc
attaaaccggaaacttaa
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