Leptodesmis sichuanensis: KIK02_12840
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Entry
KIK02_12840 CDS
T07779
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc01501
beta-Lactam resistance
lsc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KIK02_12840
01503 Cationic antimicrobial peptide (CAMP) resistance
KIK02_12840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsc02000
]
KIK02_12840
01504 Antimicrobial resistance genes [BR:
lsc01504
]
KIK02_12840
Transporters [BR:
lsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KIK02_12840
Antimicrobial resistance genes [BR:
lsc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KIK02_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UIE35978
LinkDB
All DBs
Position
complement(2728035..2731322)
Genome browser
AA seq
1095 aa
AA seq
DB search
MQNRPTGFSLSALSIRRHIGTLMLTLAVIVVGVFFINTLQVDLLPSITYPRIGVRLNAPG
ISPEVAVDEITKPLEEALSATEGVVQIYSQTREGQVSLDLFFQPGGNIDQALNDATAAFN
RARGRLPNTIEEPRLFKVDPSQFPVYELALTSPSQRPVDLRVFADEELARELGVVPGVAV
VDVAGGVDEEIQVTVDLNRLQAQGVGLNDVLTELRDRNQDISGGRISGANNEPLTRAIGR
FKNAQELRDLSFRVGGSQGAGSGDQGVGNTTGSDQGAVPTHRVYLRDFATVTDGTEEQRI
FINLNGQPGVKVSIQKQPDANTIEVVNGVKQRLQELRKSGVIPADMTLLPVLDESIFIQN
AISNVVSSGLMGAGLAAIAVLLFLGSMRQTLIIVLAIPLATLTAIILMGVFKLSLNVFSL
GGLAMGVGIVVDNSIVMLENIAEGTGMTPGRSAVSRLTPRQLIHQSINSSQEVESALVAS
TSTNLMAVLPFLLIGGLIALLFNELILTISFAVAASILIAVTVVPMLTSRLLGIRRSSGI
NKFWLLQQFNRRFDDGTRGYASLLQWVLAKRLLIVGLTILVLGGGSLWMAGQLPQEILPR
INTGQANLNAQFPPGTPLEDNQKVMAAVDKILLAQPETEYVFTTVGGFLFGSNTSENPLR
SSSTITLKPGTNVEDYVTRVTRELRQLNLVDIRLRLSPGQVRGLILNNSPVRGAEVDVIL
QGNSEEALNQAGRQVLQALEDQATLTSFRPDADARQPEIQIFPDPERLSALNLNIQNIGE
MLETAIQGSVPTQLQRGNRLVDIRVRLDRQSVQQPSQLERLPLFVEDNRQIRLGDVARIE
SGQAPGQVQRINQRQVFLIAGNLNQGASLGAALKQVDEVLNNLDLPEGVSVLPSTAAQSN
QQLQATLPVLGGLAAFLVFVVMAVQYNSLIDPLVIMFTIPLALAGGILGLFVTQTAIGAT
VIVGVVLLVGIVVNNAIVMVELANQTLKREGCDRYTAILKAGPQRLRPILMTTVTTVLGM
FPLALGLGQGGEFLQPLGIVVFSGLSLATLLTLFIIPCFYVMLHDFFDRRSRQEKVVQLP
ASISSQERRHAPDES
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcgtcctactggctttagcctcagcgctctttccattcgtcgtcacattggc
accttaatgttgacgctggcagtgattgtggttggcgtgtttttcatcaacaccctgcaa
gttgatttactgccctcaatcacctatccccgcattggtgtacggctgaatgcaccagga
atttctccggaggtagcagtggacgaaattacgaagccgctggaagaagctctatcggcc
actgaaggggtggtacaaatttactcccaaacccgtgagggtcaggtcagtctggatcta
ttttttcaaccgggcggcaatattgaccaggcattgaatgatgctaccgccgcttttaac
cgggccagaggacggttgcccaacacgatcgaggaacctcgcctgttcaaagtcgatccg
tcccagtttcctgtgtatgagttagcgcttacttccccatctcagcggcctgtagatctg
cgggtgtttgccgatgaggaattggcgcgggagttgggggtggttcccggtgtagcagtg
gtagatgtggctgggggtgtagatgaagaaattcaggtcacggttgatttgaatcggttg
caggctcagggcgtgggcttgaatgatgtgctgacggaactgcgcgatcgcaaccaggat
atttccggaggacgcatttcgggagcaaacaatgagccgctgacacgggcgatcgggcgc
ttcaaaaacgctcaggagttgcgggatttgtcgtttagggtaggagggagtcagggagcg
gggagcggggatcagggagtggggaatacaacggggagtgatcagggggctgtgccaacc
catcgggtgtatttgcgggattttgcaacggtgacagatgggacggaggagcagcggatt
tttatcaatctgaatggccaacccggagtgaaggtcagtattcagaagcagccagatgcc
aacacgatcgaggtggtgaatggggtgaagcaacggctgcaggagttgcggaaatcaggg
gtgattccggcagatatgacgttattgcccgttttggatgagtccatctttattcaaaac
gcgatttccaatgtggtgagttcggggctgatgggggcaggattggcggcgatcgcggtg
ctgctgtttctgggttcgatgcggcagacgctgatcattgtgctggcgatcccattggca
accctgacggcgattattctcatgggtgtgtttaagctgtccctgaatgtctttagtcta
gggggcctggcaatgggtgtggggattgtggtggataactcgatagtcatgctggaaaac
attgcagaagggacaggcatgactccgggccgcagtgcagttagccgtctgactccccga
cagttaattcatcaatccatcaacagcagtcaggaggtggagtcggcgctggtggcttcc
accagtaccaacctgatggcggtgctgccgtttctgttgattggtggtttgattgcgttg
ctgttcaatgagttgattctgacgattagttttgctgtagctgcgtctattttgattgcc
gtgacggtggtgccgatgctgacttcgcggctattgggaatccgccgttcgagtgggatc
aacaagttctggttgctgcaacaattcaaccgtcgttttgatgacggtacgcgtggatat
gcctcgctgctgcaatgggtgctggcaaaacggttactgatcgttgggttaaccatcctg
gttttgggcggtggtagcctctggatggccggtcagcttccccaggaaattctgccccgc
atcaatactgggcaggcaaacctgaacgctcaatttccccccggtacaccgctggaagac
aatcaaaaggtgatggcggcggtcgataaaattttgctggcccaaccagaaacggagtat
gtcttcacgacggtgggtgggtttttgtttggcagcaataccagtgagaatcctctgagg
agttccagcacgattacgcttaagcctggaacgaatgtggaggattacgtgaccagggtg
acacgggaattacgccagttgaatctggtggatattcggctgcggctcagtccaggtcag
gtgcggggactgattttgaataattctccggtacggggcgcggaagtggatgtgattttg
caaggaaatagtgaggaggcattgaatcaggccggacggcaggtactccaggcgttagaa
gaccaggccacactcaccagttttcgtccagatgctgatgctcgccagccggaaattcaa
atctttcctgacccggaacggttatcggccctgaatttgaacattcagaacatcggcgaa
atgctggaaacggcgattcagggtagtgtccctacacaattgcaacggggaaatcgcctg
gtggacatccgggtgcggctcgatcgccaatcggtacaacaaccatcccaactggagcgc
ttacccctgtttgtagaagacaatcggcaaattcgcttaggggatgtagcccggattgag
tcaggtcaggctcccggtcaggtgcagcggattaatcaacgccaggtatttttgattgcc
ggaaacctgaatcagggagccagtttgggggctgctttaaagcaagtagatgaggtgctg
aataacctggacttgccggaaggggtgagtgtgctccccagtacggcggctcaaagtaat
cagcaactccaggctactttgccagtgttgggtggactggccgcttttctggtgtttgtg
gtgatggcggtacagtacaactcgctgattgacccgttggtgatcatgtttacgattcca
ttagccttggcggggggaattctggggctatttgtcacgcaaacggcgatcggggcgacg
gtgattgtaggcgtggtgctgctggtggggatcgtagtaaacaacgcgatcgtcatggtg
gagctggccaatcaaaccttgaagcgggaaggctgcgatcgctacacagcgattctgaaa
gcaggccctcaacgactgcgacctattttgatgaccaccgttacgaccgtcttagggatg
ttccccctggcactgggtctggggcagggaggcgaatttctgcaaccgctgggaattgta
gtcttctcagggctatcgctggccaccctgttaaccctgtttatcattccctgcttttat
gtgatgctgcatgacttttttgatcggcgatcgcgccaggagaaagtagtccagttgcct
gcctccatttcttcacaagagcgtcgccatgccccagacgaatcctaa
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