Leptodesmis sichuanensis: KIK02_21440
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Entry
KIK02_21440 CDS
T07779
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc01501
beta-Lactam resistance
lsc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KIK02_21440
01503 Cationic antimicrobial peptide (CAMP) resistance
KIK02_21440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsc02000
]
KIK02_21440
01504 Antimicrobial resistance genes [BR:
lsc01504
]
KIK02_21440
Transporters [BR:
lsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KIK02_21440
Antimicrobial resistance genes [BR:
lsc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KIK02_21440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
UIE37472
LinkDB
All DBs
Position
complement(4585593..4588805)
Genome browser
AA seq
1070 aa
AA seq
DB search
MADFFIRRPVFSIVCALIILLIGAISIPSLPVDQFPDISPVQVQVSANYPGANAEVVESA
VTTILERQINGVEGLRYLSSTSSNDGSSTITATFQSTRNKNIAAVDVQNRISSVTSQLPD
TVQQTGVRVTKQANNILMGIGLYTDNQEYNTIFLSNYADLYLADALKRVPGVGNVQIFGE
RRYSMRLWLDPDRLAARGLVVQDVVNALKEQNIQVGAGRIGQSPSPKDQLYQIDLQALGR
LKDPSEFDDLIVKTGTDGTLIKLRDVGRAELGAENYTSFLRFRGKEAVGLGIFQTPGSNA
IQVAEGVKEEIEKLSRSFPPGMKYQVAFDTTLYVEESLAEVQKTLLEAILLVVLVIFVFL
QNWRTTLIPAIVIPLSLIGTFAFVKAFNFSINSLTLFGLTLATGLVVDDAIVVVENVSRL
IHDRGMNPFRAAAESMRELLGAVIATSLVLMAVFIPVAFFPGTTGALYKQFALTIVFSIG
LSTFLALTLTPSLCALLLRSEHQPPHWSAWFFNRFNRGFDRVRHTYQGWLTQLVRFKMLV
IGLFVVLIGATALLYLNVPQAFLPEEDQGYFITIVQGPEGVSLNYTDQVMARVEKILLDP
KEFPEVTGTFAVGGFGFSGSTANSGVIFTTLKPWKERKEQAASAQAIIGRLFSKVGTITE
ARVLPVNPPSIRGLGSFGGFQFQLQDQRGSGNIQDLLKTAQQLIGRANIPGSGLQRVFTQ
FAASTPQFQVEVNRDLAKALGIPVDTIFNTLQTALGSQYVNDFNLGQRSYRVYVQADQPF
RANPSDIGSLYVRSSQGEMVPLSNLVKITPTTGAQTITHFNLFRAIEISGSAAPGVSSGS
AIQNMQTVANQVLPPGFGYEWAGTALEEVESGGLAPIIFGLGLVFVFLVLSAQYENFIDP
LIIMLAVPLAILGALLAQSLRGLPNDVYCQIGLVMLIGMASKNSILIVEFANQLRERGLP
LTKAVIEASQERLRPILMTSFSALLGFTPLMLASGAGAASRVSLGTAVFGGLFVATFLSL
FVVPMLYLAINGLRDRYLPKRHSYEEAENQLDGTGRRDGSVQQPQVKESR
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttttcattcgacggccagttttttccatcgtttgtgccctgatcattctg
ctgattggagccatttccattccttccttgcccgttgaccagttccctgatatcagtccg
gtacaggtgcaggtatcagccaactatccaggagccaatgcggaggtggtggaaagtgcc
gtaacgacgattctggagcgccagattaacggggttgaaggtttgcgctacctgtcttcc
accagcagtaatgatggctccagtacgatcacagcgacgtttcaatccactcgcaataaa
aacattgctgccgtggatgtgcaaaaccggatttcatcggtgacttcccagttgccagac
accgtacagcagacgggagtgcgggtaacgaagcaggccaacaatatcctgatggggatc
ggcctttatactgataaccaggaatacaacacaattttcttgagtaactacgccgatctt
tacctggccgatgctttaaagcgggtgcctggagttgggaacgtgcagatttttggagaa
cggcgttactccatgcggctatggctggatccagatcgattggcggcacggggactggta
gtgcaggatgtggtgaatgctctcaaggagcaaaatattcaggtgggagcaggccggatt
gggcaatctccgtctcccaaggatcagctttaccagatcgatttacaggctctcggtcga
ttaaaggatccttctgagtttgatgatctgattgtcaaaacgggtacggacggaacgttg
attaagctcagggatgtgggccgcgctgagttaggggcagaaaattacaccagtttcttg
cggtttagaggtaaagaagcggttggtctggggattttccaaactcccggcagtaacgcg
atccaggtggcggagggtgtgaaagaggaaatcgagaaactatcgcgatcgttcccccct
ggcatgaagtatcaagtggctttcgacaccacgttgtatgtggaagaatccctagcggag
gtgcagaagacactcctggaagctatcttgctggtggtgttggtaatttttgtctttttg
caaaactggcgcacgacgttgattccggcgatcgtcattcccctctccctgattggcacc
tttgcctttgtcaaagcgtttaatttctcgatcaacagtctcaccctgtttggcctgact
ctggctacgggactggtggtggatgatgcgatcgttgtggtagaaaatgtcagccgtctg
attcacgatcgtggcatgaaccccttccgagccgctgctgagtccatgcgggaattgctg
ggagcggtgattgctacgtctttagttctgatggcggtgtttatcccagttgcctttttt
ccaggaacgacaggcgcactgtacaagcaatttgctctgacgatcgtcttctccatcggt
ctatctacctttttggcgctgactctaaccccttccctgtgtgctttacttctgcggtca
gagcatcaaccgccacactggtcagcctggttctttaatcggtttaatcgagggttcgat
cgcgtgcggcacacctatcagggatggctaactcagctagtacgattcaaaatgctggtg
attggcctatttgtggtgctgattggagccacggcgctgctgtatttgaatgtgccgcaa
gcctttctacccgaagaagatcagggctacttcattacgatcgtgcaggggccggaaggg
gtatcactgaattacaccgatcaggtgatggccagggtagagaagattttgcttgaccca
aaagagtttcccgaagtaaccggaacctttgccgttggtggctttggctttagtggtagt
actgccaactcgggggtaatctttaccaccctgaagccgtggaaagaacgaaaagagcaa
gcagcatcggctcaggccattattggccgcttgttcagtaaggtgggaacgattacggaa
gccagagtcttaccggtcaacccaccctctattcggggcctggggagctttggtggattt
caatttcagttgcaggatcaacgcggtagcggcaacatccaggatcttttaaagacagca
cagcaactcattggacgggccaatataccgggcagtggtttgcaacgggtctttactcag
tttgccgccagtacgccccagttccaggtagaggtgaatcgagatctggcgaaagcgttg
gggattcccgtggacaccattttcaatacgctgcagacggctctggggtcgcaatatgtc
aatgatttcaacctgggacagcgcagttaccgcgtgtatgtgcaggcggatcaacccttc
cgggctaatcccagcgatatcgggagtctgtatgtgcgatcgagccagggagaaatggtg
ccgctcagtaatttggtgaagattacaccgactacaggtgctcaaaccattacgcacttc
aacttgttccgggcgatcgagatttctggaagtgctgcgccaggagtcagttcaggatct
gccattcagaatatgcaaacggtcgccaatcaggtgttgcctccaggttttggctatgag
tgggccggaactgccctggaagaagtggaatccggcggtctggctcctattatctttggg
ctgggtctggtgtttgtgtttctggtgttgtcagcccagtatgagaacttcattgacccg
ttgatcatcatgctggccgtcccattggccattttgggtgcactcctggcccaatcctta
cgtgggttacccaatgatgtttattgccagattggtctggtgatgctgattgggatggcc
agtaagaactcaattctgattgtggagtttgccaaccagttacgggaacgggggctgccc
ctgaccaaagccgtgattgaagcttcgcaggaacggttgcggcctattttgatgacctcc
ttctctgccttgttagggttcactcccctgatgctggcttctggcgctggagccgccagt
cgggtttccctcggtacagccgtttttggggggttatttgtcgccacgtttctgagcctg
tttgtagtacctatgttgtatctcgcgattaatgggttgcgcgatcgctacctgcccaaa
cgtcattcctatgaggaggcggagaatcaattggatggcaccgggagaagggatggctca
gttcagcaaccccaagtcaaagaaagccgttga
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