Leptodesmis sichuanensis: KIK02_21445
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Entry
KIK02_21445 CDS
T07779
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc01501
beta-Lactam resistance
lsc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KIK02_21445
01503 Cationic antimicrobial peptide (CAMP) resistance
KIK02_21445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsc03036
]
KIK02_21445
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsc02000
]
KIK02_21445
01504 Antimicrobial resistance genes [BR:
lsc01504
]
KIK02_21445
Chromosome and associated proteins [BR:
lsc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KIK02_21445
Transporters [BR:
lsc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KIK02_21445
Antimicrobial resistance genes [BR:
lsc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KIK02_21445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
NQRA_N
Fil_haemagg
HlyD_2
Myosin_tail_1
Motif
Other DBs
NCBI-ProteinID:
UIE37473
LinkDB
All DBs
Position
complement(4588969..4590387)
Genome browser
AA seq
472 aa
AA seq
DB search
MSVFDSSQDGTSTKVEELEVSSTTGKSKRSPFHSKPSGQRWLAILGLVLLTLGVGFGWRW
WQASHSGPQPGAMPGMAGGIPVKLGTAQTAQVQDASEYVGSLDSRQSVVLQPEITGRVSQ
IYVKAGDRVRKGDPLIQVKPQEQEAQLASNLAAVNSARATRSNAFSQLQAQEANRIAKQA
EVDLQNQQYQRIQALVKEGALPQQQLDQVERDRFQAISELRALDRQIQAARANLSEAEAG
LQQAKANANVTNVRLQQTTTVAPFDGVVGDIPVKLGQLVSTSDTLTSVTQNEVLELNLSI
PLERASELREGLPVQLLNHQGGVLSSGQISFVSPQADNRAQSILAKATFDNRAGALRAGQ
FAKARVVWRSRPGILVPTAAISRLGGETFIFVAQPMDNTCKEMMSKMPQAGPPAGAPPGN
APTLIVRQRPVKLGAIQGNSYNVLDGLKPNEQIVLSGILNLSECAPIAPVSQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttttgattcttctcaagatggaacttccaccaaagttgaagaactggaagtt
tcttcaactactggcaagagtaagcgatcgcccttccactcaaaaccttctggccagcgc
tggttagcgattctgggattggttctgttaacactaggggtaggatttggctggcgttgg
tggcaggccagccattccgggccgcagccaggagccatgcctgggatggctggcggcatc
ccagtgaaattgggaaccgcccagaccgctcaggtgcaagatgcttcagaatacgtggga
tccctggattcgcgccagtccgttgtgctgcagcccgaaattactgggcgagtgagtcag
atctatgtaaaagcgggcgatcgggttcgcaaaggcgatcccttgattcaagttaaaccc
caggagcaagaagctcagttggcgagtaacctggcagccgtgaattccgctcgtgcgacc
cgttccaatgctttttctcaacttcaggcccaggaagcgaatcggattgccaaacaggca
gaagtagacttacagaatcagcaatatcagcgaattcaagctttggtcaaggaaggagcg
ttaccacagcaacagttagatcaggtggaacgcgatcgctttcaagcgatttcggaatta
agagcactcgatcgccagatccaagccgcaagggccaacctttctgaagctgaagccggt
ctgcagcaggccaaagccaatgccaatgttaccaatgtacgattgcaacaaacaacaacc
gtggctccctttgatggggtggtgggtgacattcccgtaaaactgggccagttggtttct
accagcgacaccctcaccagcgttacccagaatgaagtgctggaactgaacctttcgatt
ccgctagaaagagcctcggaattacgcgaaggcttaccagtccaacttttgaatcatcag
ggaggcgttctcagcagcggacagattagctttgtttctccccaggccgacaaccgtgct
cagagcattctcgccaaagcaacctttgacaatcgggctggcgcactgagagcaggacaa
tttgccaaggccagagtcgtgtggcgatcgcgtcctggcattctggtgcccacggctgcc
atttctcgtctgggtggcgaaacctttatctttgtcgcccaaccgatggacaacacctgt
aaagagatgatgagcaaaatgccccaggctggcccacccgcaggcgcacctcccggcaac
gctcccacgttaattgtccgccaacgccccgttaaattgggagccattcagggcaatagt
tacaacgttctggatggcctcaagcccaatgaacaaatcgttctctccggaattttgaat
ttgtcggaatgtgcgccgatcgccccagtgagccagtag
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