Listeria seeligeri: lse_1880
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Entry
lse_1880 CDS
T01184
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lse_1880 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_1880 (nth)
Enzymes [BR:
lsg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
lse_1880 (nth)
DNA repair and recombination proteins [BR:
lsg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lse_1880 (nth)
Prokaryotic type
lse_1880 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
HHH_8
DUF4487
Motif
Other DBs
NCBI-ProteinID:
CBH28031
LinkDB
All DBs
Position
complement(1931443..1932102)
Genome browser
AA seq
219 aa
AA seq
DB search
MLSNKQTVLCIEEMAKMFPAAHCELIHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH
RPEDYLTVSLDELMDDIRSIGLYRNKAKNIQGLSQKLLTEFNGEVPQTHAELESLPGVGR
KTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELWSDAHHY
MIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFDG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgctatcaaataaacaaacagtattatgcatagaagaaatggccaaaatgtttccagct
gctcattgtgaattaattcataaaaatacgtttgaattactagtggcagttgttttatct
gcacaatgtaccgatgtgcttgtaaatcgtgtgacagcttctctttttgaaaaatatcat
cgacccgaagattatttaacggtatcactcgatgaattaatggatgatatccgttcaatt
ggattatatcgaaataaagctaaaaatattcaaggtttgtcacaaaagttgctaactgaa
tttaacggagaagtaccacagacgcatgcagaacttgaaagcttacccggcgttggtaga
aaaacagccaatgttgtactgtcggttggttttggtgtgcctgctatagctgtagatact
cacgtggaacggattagtaaacgacttggtatttgtagatggaaagattctgtagtagaa
gtggaagaaacattaaaacgaaaattaccggaagagctatggtcggatgcgcaccattat
atgattttcttcggtagatatcactgtaaagcacgaaatccagaatgtccgacatgtccg
ttactttatttatgtcgcgaaggcaaaaaacaagcgaaagtgaggggattcgatggctga
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