Lacrimispora sinapis: VIG27_02310
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Entry
VIG27_02310 CDS
T10884
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lsia Lacrimispora sinapis
Pathway
lsia01501
beta-Lactam resistance
lsia01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VIG27_02310
01503 Cationic antimicrobial peptide (CAMP) resistance
VIG27_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsia03036
]
VIG27_02310
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_02310
01504 Antimicrobial resistance genes [BR:
lsia01504
]
VIG27_02310
Chromosome and associated proteins [BR:
lsia03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VIG27_02310
Transporters [BR:
lsia02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VIG27_02310
Antimicrobial resistance genes [BR:
lsia01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VIG27_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
Biotin_lipoyl_2
HlyD_D23
Biotin_lipoyl
PTS_EIIA_1
OEP
Motif
Other DBs
NCBI-ProteinID:
XIJ21711
LinkDB
All DBs
Position
525687..526844
Genome browser
AA seq
385 aa
AA seq
DB search
MTKKNIIKIAGSVIVIAAVAGLILPRILGGGKEEIVAEVPPVVTVVKPENRTIEVSSELI
GTVEPDSIVYVTPLGSGEVTSVNVQTGDMVTAGQLICVIDTKQVESSRIAAETARISYED
AKKNLDRYTVLYQAGDVAEADYQSLVDKVQLAKLQYDNAKIAYNIQLESSQVTAPIAGRV
ESLNIKVHDMVSPQTNLCVISGEGGKAVTFYVPERIVNGLKTGDSIRVEKNGTERAATIT
EVSTMIDQTSGLFKVKASVPDGNTLATGTSVKLYVISQRADNVMSVPVDSVYYEGGNPFV
YTYADGKLKKNAVTVGLSDDNFAEIKEGIGAGDQVVATWTSELYDGSVVTLADETKDEKQ
AADKTASDATAETEGTTAETSGSVQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaaaatataataaaaattgcaggttccgttatagtgatcgctgcagtggca
gggcttatccttcccagaatattaggcgggggtaaggaagaaatcgtagcagaggttccc
cctgtggtaacggtggtaaaaccggagaaccgtacgatagaggtaagcagcgagctgatc
gggaccgtggaaccagacagcattgtatatgtgactcctctgggatctggagaggtcaca
agcgtaaacgttcagaccggtgatatggtaactgccggacagcttatttgcgtcattgat
acaaaacaggtggaaagctccaggatagcagcagaaacggcaagaatcagctacgaagat
gcgaaaaagaatttagaccgttatacggttctttatcaggcgggagatgttgctgaggca
gattaccagtccctcgttgacaaggttcagcttgcaaagctccagtatgataatgcaaag
attgcatacaacatccagctggaaagcagccaggtaacagcaccgattgcaggacgcgtg
gaaagccttaatataaaggtccatgatatggtttctccccagaccaatctttgtgtcatt
tccggcgaaggcggtaaggcagttactttttatgttccggaacggatcgtcaacggatta
aagaccggagacagcatccgggttgagaaaaacggaaccgaacgagcagcaaccattaca
gaagtaagcaccatgattgaccagacaagcggcttgtttaaagtgaaagcttctgtgccg
gatggaaatacactcgctacaggaacctctgtaaagctttatgtcatttcccagagagcg
gataatgtaatgtctgtgccggttgacagcgtttactatgaaggcggcaatccttttgtc
tatacatatgcagatggaaagttaaagaagaatgcagttaccgtaggtttgtcagacgat
aactttgcagaaattaaggaggggattggtgccggtgaccaggtggttgccacatggacc
agcgaactctacgatgggtctgtagtaacccttgcagacgaaactaaagatgagaaacag
gcggcagacaaaacagcgtcagatgccacagctgaaacggaaggaaccactgcggaaact
tctggatcagtacagtaa
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