Lacrimispora sinapis: VIG27_02315
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Entry
VIG27_02315 CDS
T10884
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lsia Lacrimispora sinapis
Pathway
lsia01501
beta-Lactam resistance
lsia01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VIG27_02315
01503 Cationic antimicrobial peptide (CAMP) resistance
VIG27_02315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_02315
01504 Antimicrobial resistance genes [BR:
lsia01504
]
VIG27_02315
Transporters [BR:
lsia02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VIG27_02315
Antimicrobial resistance genes [BR:
lsia01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VIG27_02315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF5764
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
XIJ21712
LinkDB
All DBs
Position
526861..529893
Genome browser
AA seq
1010 aa
AA seq
DB search
MGITKLALKRPVTTVLIVLCLIVFGFSSIMSAKLEMIPEMDTPILTISSVYPGASPEDVN
DLVTKPIEDEVGTLSGIKSVQSTSKENVSIVILRYDYGTNMDKAYSDLKKKMDNIKLPDD
VKTPSIMEFDLSATATLTLAVNDPSQENLYNYVKNVIVPEFEKISSVASIDMSGGREGYM
RVRLDPEKMNQYHLSMNSITQAIQAADITYPAGNTGVGNRNLALSTSVEVNTLESLKKVP
VVAGNGKTILLEDVADIENTVKEQKAIGRYNGKDTITLAVNKQQKSSAIEVSDEVHKTIE
TLKQDHKNLDVVVIDDTSDNIKESLYSVMETMILAVVISMIIIFMFFGDIKASLIVGSSI
PVSILVALILMTGMGFSLNTITMSAIVLGVGMMVDDSIVVLESCFRAQKGTEYESSAIEG
TKTVLQSILGGTITKCVVFIPLVFLAGMTGQIFKPLGYTIVFCMMASLISAMTIVPLCYS
RFRPVEKHNSPLGGIVKAMQAGYRVLIDKLLNRKGVVMIVSVLILFGSFLLAGKLGFELL
PETDQGTIAITAKVKPGLKIEEVDKILHKVESIVTAEKDLDSYTLTYGGDGESLESTSDA
TLTAYLKDDRTLSTKEVINKWKKEMGQLPDCNISIVSSSSMSMTASKNDYEVILMGPQLN
ELKKTSDELVSDLTKRPELIKVHSDLENAAPVIKVKVDSLKAAAEGIAPATVGGMLNNML
SGVEATTFDTDGQEISVNVEYPDDSYDTLDKVRGIMIPKASGGSVALTDIASIGYEDSPS
TITRKDKQFQVTVTGSFTDKVKTKEDKAEALKQIDKDVVSKYLNGSITRGTNSQDESMNE
EFGSLFTAIATAIFLVFVVLAAQFESPKFSLMVMTTIPFSFIGAFLLMLVADVSVSMTSL
LGFLVLIGTVLNSGILYVDCANQFHETMDVRGAVVEAGFTRLRPILMTSVIAILSLIPLA
RGAGESGELMQGLALVNIGGLASSTVLSLLVLPVLYTLMSRKKKKNITAE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgggaataacgaaacttgcgctaaaacgccccgttaccacggttctgatagtactttgt
ttaattgttttcggtttttcatccataatgtcagcaaagcttgagatgattccggaaatg
gatacaccaattttgacaatcagcagtgtctatccgggtgccagccctgaagatgtgaat
gatctggtcacaaagcccatagaggatgaagtgggtacactctccggtataaaaagtgta
cagtccacatcaaaggaaaatgtttccatcgttattttgcgttatgattatggaaccaat
atggataaggcttattctgatttaaagaagaagatggataacatcaagctgccggatgac
gtaaagacacccagcatcatggaatttgatttgagtgcaacggcaacgctgacgcttgcg
gtgaatgatccctctcaggaaaacctttataattatgttaaaaatgtgatcgtaccggag
tttgaaaagatctcatcggttgccagcattgatatgagcggcggccgggaaggttatatg
agagtgcggttggatcctgaaaagatgaatcagtatcatttgagcatgaactctattacc
caggccatacaggcggcggatattacatatcctgcaggaaatactggtgtgggtaaccgg
aatctggcactcagtacttccgttgaagtcaatacgctggaaagcttaaagaaggttccg
gttgtggcaggcaacggcaagacgatccttctggaagatgttgccgatattgagaatacg
gtaaaagagcagaaagccatcggacgctataacggtaaggatacaatcacattagccgtt
aataaacagcaaaaaagcagtgccattgaagtatcggatgaagtacataaaacaatcgaa
acattaaaacaggatcataagaatctggatgtagtcgttattgatgataccagtgataat
attaaagaatccctgtacagtgttatggaaactatgattctggcggttgttatatccatg
atcatcatctttatgttctttggcgatatcaaagcctccctgattgtcggaagttcgatc
ccggtatccatattggtggccttgattttaatgacgggaatgggattttccctgaatacc
atcaccatgagtgcgatcgttctcggcgtcggaatgatggtcgacgattccattgtagtg
ctggaaagctgttttagagcacaaaaaggcacagagtatgaaagctctgcaattgaggga
acaaaaacggtgctgcagtctatccttggcggtacaattacaaagtgtgttgttttcatc
ccactggtattccttgcaggtatgacaggtcagatctttaagcctttgggttatacgata
gtattctgtatgatggcctcccttatatccgcgatgaccattgttccactgtgctattcc
agattccgtccggtagaaaaacataactctccgttaggcggaattgtaaaggcaatgcag
gcggggtatcgggttctgattgataaactccttaatcgaaaaggagtggtcatgatcgtt
tcggtattgattttatttggctccttcctccttgcaggcaagcttggatttgaactgctt
ccggagacggatcaggggacgattgccattacggcaaaggtaaagcctgggcttaaaatc
gaagaagtggataagattttgcataaggttgagtccattgtaactgcggaaaaagatttg
gattcctatacgctgacctatgggggcgatggcgagagcctggaaagcacgtcagatgcg
accttaactgcgtatctaaaggatgacagaaccttaagcacaaaggaagtcattaacaaa
tggaagaaggagatgggccagctccctgattgtaatatcagcatcgtgtcctcctccagc
atgtcaatgactgccagcaagaatgactatgaagttatacttatggggccgcagctcaat
gagctgaagaaaacgtctgatgaactggtttcagacttaacaaaacgtccggaactgatc
aaagtccattctgatctggagaatgcggcaccggttatcaaggttaaggttgattccctg
aaggccgcagcagaaggcatcgcacccgctacggtaggaggtatgctcaataacatgtta
agtggtgtggaagccactacctttgatacggacggacaggagatatctgtaaatgtagaa
tatccggacgattcctatgatacacttgataaggtacgggggatcatgattccgaaagcg
tccggtggctcagtagcccttacggatattgcttctattggctatgaagacagcccgtcg
acgattacccgaaaggataaacagttccaggttacggtaaccggttcctttacggataag
gtaaaaactaaggaagacaaggcagaagccttaaagcaaattgataaagatgtggtaagt
aaatatttaaacggttccatcacaagaggtaccaacagccaggatgaatccatgaatgaa
gagtttggcagtttatttacggcgattgccactgctatattcctggtattcgtagttttg
gcggcacagtttgagtctccgaaattttctcttatggttatgactacgattccgttcagc
ttcatcggtgcgtttctgctgatgctggttgccgatgtcagtgtcagtatgacctctctg
ctgggctttctggtgttgatcggtacggttcttaactcaggaattctgtatgtggattgt
gccaatcagtttcatgaaaccatggatgtaaggggcgctgttgtagaagcaggatttacc
agactccgcccaatccttatgacgtctgtaatcgctattttatctctgattcctctggca
cggggagcaggagagagtggggaactgatgcaggggcttgcactggttaatattggtgga
cttgcttcatctaccgtattatctctgttggtactgcctgtactttataccctcatgagc
cgtaagaaaaaaaagaatatcacggctgaataa
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