Leptidea sinapis (Wood White): 126964491
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Entry
126964491 CDS
T09272
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126964491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126964491
Spliceosome [BR:
lsin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126964491
Complex C
U5 SnRNP specific factors
126964491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
126964491
NCBI-ProteinID:
XP_050663601
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All DBs
Position
5:3885386..3904866
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AA seq
975 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSDDEQSVYGQDNRDADEDAMEEDDDADAEPEVAPMSVVLH
EDKRYYPQAIEVYGPDVETVVQEEDTQALDKPLIEPVKNKKFQLQEQQLPYTTYDMEYMA
DMLDNTNLMRNIALMGHLHNGKTSFVDCLIRQTHPDTINNETTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKDVKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVIFVDAAEGIMLNT
ERMIRHAVQERVPLTLCINKIDRLILELKLPPADAYYKLRHIIDELNSMLETHQPQDNPE
EPATVFSPLLGNVCFASSLYDVCFTLESFAAMYAQAHDCGLVSSEMAAWLWGDVYFNAKT
RRFTKKQPHSSAQRSFVEFILEPLYKIFAQVVGDVDSTLPEVLEELGIKLTKLESKLNVR
PLLRLVCSRFFGDFCGFVEMAVRHVPSPLDAAQRKVAHCYRGVSGPLYEDMINCDQSGRL
VAHTTKMYPTDDCTFFLVLARVMSGTLYAGQSVRVLGENYSTQDEEDSRLMNVGRLWIYE
ARYKVELNRVPAGCWALIEGIDQPIVKTCTLVSADEEEELHTFKPLRFNTQAVVKIAVEP
VNPSELPKMLDGLRKVNKSYPVLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDIK
VADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKRL
GEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWGT
REGPLCEEPIRNVKFKILDAVIASEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFV
EVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQGQ
AFCLQVFHHWQIVPGDPLDKSIVIRPLEQQPATHLAREFMIKTRRRKGLSEDVSINKFFD
DPMLLELARQDVQFN
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgatttatatgacgaatttggtaattatattggtcctgacttagagtcagat
tcagacgatgaacaaagtgtttacggacaagataatcgtgatgcagatgaggatgccatg
gaagaagacgatgatgctgatgcggaaccagaggtggctcccatgtcagtcgtattacac
gaggataaacgttactatccccaagcaatagaggtgtatggcccagatgtagagacagtc
gtccaggaggaagacactcaagccttggacaagcctctgattgaacctgtgaagaacaaa
aagtttcaactgcaagaacagcagctcccatataccacatatgatatggagtacatggca
gatatgcttgacaacaccaacctgatgaggaatatagcactgatgggacatctgcataat
ggaaaaacatcatttgtggattgtttaattcgtcaaacacacccggacacaattaacaat
gaaacgacaatacctatgagatacacagacacgctgtttgtggagcaagagcgaggtgtt
tccatcaagtcaatgccggttacattgctcctgaaggatgtgaagggaaagtcacatctt
ttaaacataatggatacaccgggacatgtgaacttcagtgatgaagttactgcagcgtta
agaatatccgatggtgctgtaatatttgttgatgctgctgagggtattatgctgaacact
gagagaatgatacggcatgcagtccaagaacgggtgcctctcactttgtgcattaacaag
atagacaggctcatattggagttgaaacttccacctgcagacgcatattataagttgaga
catattattgatgagctcaattcaatgctggaaacacatcaaccacaggataatccagag
gagccagccactgtgttctcgccactgctcggcaatgtttgttttgcatcgtcgctgtat
gacgtgtgcttcacgctcgagtctttcgccgcgatgtatgcgcaggcgcacgactgcggg
ctcgtgtcctctgagatggcggcgtggctttggggcgatgtgtacttcaacgccaagacg
aggcggttcaccaagaaacagcctcactcgtccgcccagagaagcttcgtggagttcata
ctggagccgctctataagatctttgctcaggtggtcggtgatgttgacagcactctgcca
gaagtacttgaagagttaggcatcaagctgacgaagctggaatccaagctcaatgtccga
ccattgctccgcctcgtctgcagtaggttcttcggagatttttgtggtttcgtcgagatg
gcagtgcggcacgtgccttcccccctagacgcggcccagcggaaggtcgcccactgctac
cgcggggtgtcgggccccttgtacgaggacatgattaactgcgaccagtccggccgcctg
gttgcgcacaccaccaagatgtacccaacggacgattgcacattcttcttggtattggcg
cgtgtaatgtctggaacgctgtacgcgggacagagcgtgcgcgtccttggagagaactac
agcacacaggacgaagaggactccaggctgatgaatgtcgggaggctgtggatatacgaa
gctagatataaggttgaattgaatcgagtaccagctggttgctgggctctcatcgaaggc
attgaccagccgatagtgaagacctgtaccctcgtctcagctgatgaagaggaggagctc
cacacattcaagcccctgaggtttaacacccaagcggtggtgaagatcgctgtggagcca
gttaacccttcagaattgccgaaaatgcttgacggattgagaaaggtgaacaaatcatat
ccagttctgtccactcgtgtggaggagagtggagaacacgtgatcctgggtaccggcgag
ctctacctggactgcgtgatgcacgacctgagaaatatgtactccgagattgatatcaaa
gttgcggacccggttgtgtcgttctgcgagacggtggtagaaacttcgtcgctcaagtgc
ttcgcggagacgcccaacaaacgcaacaagctgacgatgatcgccgagcctctggagaga
ggtctggctgaggacatcgaggcaggcgcagtctgcgtcacctgggaccgcaagaggcta
ggagagttcttccagaccaaatacgactgggatttgctggctgctcggtcgatctgggcc
ttcgggccagacgccactggacccaacatcctggtggatgacacactgccctccgaagtg
gataaacatctactcgcgtctgtcaaggacagcatcgtgcaagggttccagtggggtacg
cgcgagggtcctctctgcgaggagcctatccgtaatgtgaagttcaagatcctggacgcc
gtgatcgccagcgagcctctgcaccggggcggcggacagatcatacccaccgctcgccgg
gtggcgtactctgcattcctgatggcgacgccgcgtctgatggagccctacctgttcgtg
gaggtgcaggcgcccgcagactgcgtgtccgcggtctacaccgtgctcgccaaacgacga
ggtcacgtgacgcaggacgcgcccgtgcccggatcgccgctgtacaccatcaaggctttc
gtgcccgcaatcgactcgttcggcttcgagactgacctgcgcacgcacacgcagggacag
gccttctgtctgcaggtgttccaccactggcagatcgtgcccggagacccgctcgacaag
agtattgtgatacgacctctggaacagcagccggcgacacacttggcgcgagagttcatg
ataaagacacgtcgacgcaaagggctaagcgaggacgtgtccatcaacaagttcttcgac
gatcctatgttgttggagcttgcgagacaagatgtacagtttaattaa
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