Leptidea sinapis (Wood White): 126966913
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Entry
126966913 CDS
T09272
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126966913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126966913
03032 DNA replication proteins [BR:
lsin03032
]
126966913
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126966913
mRNA cycle factors
Common to processing body (P body) and stress granule
126966913
DNA replication proteins [BR:
lsin03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
126966913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
126966913
NCBI-ProteinID:
XP_050667151
LinkDB
All DBs
Position
11:complement(12068099..12129707)
Genome browser
AA seq
1590 aa
AA seq
DB search
MDDDCKDYRKSKPQQKLYKPGSGPLRRSRYGFDVKMDSYSVNSDMRSKERNYYGSVNSVN
GEPESCKDHNTTNSRYRKPGLQLYQARAGDAERGDNSSQCNNRQVKSRQENHSYSGSTGS
YNRGGKTETHKDGACKDINYNKQLKKGSDSSSPIRNNHGYNTSERNRDSRSMETWTGRHN
LNTGGKPPSGRRNSAGYANEPRQKQIVDLDNIPPRFRKKYLEQAGHHSIENIDQYNKGSN
ELAQSVNQVPQFTTSTWSQTLPSRGRGRLKDYNNFDKEKINSFLRNYDVQNSHRSTPSSS
CTNLFESSNFMPKGGATQFCGYEKQIDTYENGLSTNKGSTSHIDNTQDLSTTSISQIDSE
ESKDVEPISSTLSDMTNLDWTEEVEKNIKLDEISEPSTSFSKSIQETKAAEPKESKRRSR
HRDKRSSSRGHRNSEKKERSRKDSNVSVQYEPERHRRDSNVSVHTHDINGQGLKHHERER
RDSHRSNKSSTIGNSRDDLDRWRSLRSYSREQSTERKIVSQCNSRGTSVNRALSPRDSEG
FRVPCNKSGNWTANNQKRNDSSWVNRRPSSIERRRGSPTPSTTSVEPLSENLDMNTSSSS
GRRNRKKGGKRRGRNSENVQPSPVPPGSTPAPTNVNWREEIIEAKKHQADRHTDNSHQRK
RLNSVMSDKSTSDVSSSQPGLLVLPQGSSTHTHKDQHTRGGATENQKTLFDPHNPSRPIV
HTTSKPDVRMERGLKEMSLRNGLGYECGVTEVEVAGEAGEAGEAGEAGRGARHVALLQQV
DRADAILKTQALRPPLALAHGWHDVAGTRKFLQNALQKLLLSDLKYCQADNIEQQFWKIL
YYHFIETLRKHIIQVSPEEKVEIVKLINVIIDEGYVFYENLIQLLEKTYKFNTEDYLNNN
HSLPPKGLGYVGLAMISVQKLYVCLGDLARYKEQVNESHNYAKSKFWYTKAQQINPKNGR
PYNQLAILAIYARRKLDAVYYYMRSLMSSNPFQSARESLLSLFEENRKKYEAAERKRRVV
LESKTVETEFEGSSRREVWIRPGTQRPTTDNLIQQDFDAMTPVELNKNFITAYLHVHGKL
VTKIGMETFDESATQMLAQFRALLHRQPLPTPAARLLQLTALNMFAVEMNTAPAKGKNGN
EERSAWLECALGVALMMFGALLERCCALLPEPPQSQQHTDALSLLPAIKVWSDWMLCHSS
VWNPPPSFDNFGTESDKDPWDWMATLMNILESYDDKTIQFESGPKEGYAPVRLAEDSSLA
GFTPLMYMEPAVAWVSSDPPLPHHAAEHALRTRKLLFFGTEYLVGVEPPVLKLEYPADSQ
PRYVSAVQRTITDYPPLQQLTEKSEDETNPSGEIDEPTGNSEGVDVEGADEVTKRLLRRK
EQLESRNATLEKRRQRMQEMLGSGGAAPELEVRPRFLVPDTNCFIDHLHLIRTLSAHNPY
NIVVPLVVMSELEGLCRCARLGGACRDALAWVASAGPRVRLATARGSLLASRAFTAEHHR
PATNDDRVLDTALNLHANLTDPADTKDDGERKTRRVCEVVLLTDDRNLRVKALAAELPAR
DLLSFMQWAGIASELQKPEVQTIPTPNDTK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgattgtaaagactacagaaagagtaaaccacaacaaaaactttacaagcca
ggtagtggccctttaagaagatcaagatatggttttgatgttaaaatggattcatatagt
gtaaatagtgatatgagatctaaagagaggaattattatgggtctgtaaattctgtaaat
ggtgaaccagagtcatgcaaagaccataacactactaacagtcgatacagaaaaccaggt
ctacaactgtaccaagccagagcaggtgatgcagagaggggtgataattctagtcaatgc
aataatagacaagtgaaaagtagacaagaaaatcatagctatagtggtagtacagggtct
tataataggggtgggaaaactgagacacataaagatggagcctgtaaagatataaattac
aataagcagctaaaaaaaggatctgattcatcatccccaataagaaataatcatgggtat
aatacatccgaaagaaaccgtgacagcagaagcatggaaacttggactggcagacataat
ttaaatactggaggtaaaccaccttctggcagaagaaattcagcagggtatgccaatgaa
cctcgccaaaaacaaatagtagatttggacaacatacctccccgcttcagaaaaaaatat
ttagaacaagcagggcatcatagcattgaaaatatagatcaatataataagggttcaaat
gagttagctcagtctgttaatcaagtaccacagtttacaacatcaacctggtcacaaaca
ttgccctccaggggcaggggtcgcttgaaggattataataattttgacaaagaaaagata
aattcatttttacggaactatgatgtgcaaaattctcaccgatcaacacccagtagttct
tgtacaaatctatttgaatctagtaattttatgcctaaaggaggtgcaacacaattttgt
ggttatgaaaaacaaatagatacctatgaaaatggtttgtctacaaataaaggaagtact
agtcatattgacaacactcaggacttgagtacaacaagcataagtcaaattgatagtgaa
gagtctaaagatgtagaacctataagtagcactctctcagatatgacaaatctggattgg
accgaggaagtagaaaaaaatattaagttagatgaaatctcagagccttcaactagcttt
tcgaagtctattcaagaaactaaggcagctgaaccaaaggaatccaaaagaagatctcgg
catagggataaaagaagctcaagcagaggtcacaggaattctgaaaagaaggaaagatcc
agaaaggacagtaatgttagtgttcagtatgaaccagaacgccaccgtagagacagtaat
gttagtgtccacacacatgacattaatggccaaggactcaaacaccatgagagagagaga
agagacagtcatagaagtaataaatcttcaacaattggcaacagcagggatgatttagat
aggtggagatcattgaggtcttacagtcgggagcaaagtacagaaaggaaaattgtatcc
caatgcaacagccgaggcacatcagttaaccgagctttaagtccaagagacagtgagggc
tttagagtaccgtgcaacaaatcgggaaactggactgcaaataatcaaaaacgtaacgat
tcctcatgggtgaatagaagaccatctagcattgagcgtcgccggggttcaccgactcca
agtaccacaagcgtggaacccttgagtgagaatctagacatgaacacgagttcatcaagt
ggacgcaggaaccggaagaagggcggcaagagacgcggtcggaattcggagaacgttcaa
ccttctcccgtgccacccggatccactcctgcgcccaccaatgtcaactggcgcgaggaa
atcatcgaagccaaaaaacaccaagctgatcggcataccgacaattctcaccaaagaaag
aggctgaatagtgtgatgtcagataaatctacatcggacgtgtcttcctctcaaccgggc
ctgcttgtattgcctcaaggatcatcaacacatacacataaagatcaacacactcgcgga
ggcgctacagagaatcaaaaaacactatttgatccccacaatccttcaagaccgatcgtt
cacaccacctctaaacctgatgttagaatggaaagagggttaaaagagatgtcgctgcgt
aacgggttggggtacgagtgcggcgtgacggaggtggaggtagcgggcgaggcgggggag
gcgggggaggcgggcgaggcggggcgcggtgcgcggcacgtggcactgctgcagcaggtg
gaccgcgctgacgccatcttgaagacgcaggcgctgaggccgccgctcgcgctcgcgcac
ggctggcacgacgtcgccgggaccagaaaattcttgcaaaatgccttacagaagcttctg
ttatcagatctaaaatattgtcaagcagacaacattgaacaacaattctggaaaatatta
tactatcacttcatagaaactttacggaaacatattattcaagtctcacccgaagaaaaa
gtagaaattgttaagcttataaatgtaataatcgatgaaggctatgtgttttacgagaat
ctcattcagttgttagaaaaaacgtacaaatttaacactgaggattatctgaacaataat
cattcgcttccaccaaagggtctcggctatgtgggcctcgctatgatctcagtacaaaaa
ctttatgtatgcttaggtgatttggctaggtataaggagcaagtaaacgaatcccacaac
tacgcgaagagcaagttttggtatactaaagctcagcagatcaatccaaagaatggtcgt
ccatataatcagttggcaatactggccatatatgctagacgaaaactggatgcagtgtat
tactatatgaggagtttaatgtcatcgaatccatttcaatcagcgcgcgagagtttgcta
tcattatttgaagaaaatagaaaaaagtacgaggctgctgaacgcaagcgccgtgtagtt
ctggagtccaaaacagtggagactgaatttgagggtagttcaagacgcgaggtgtggatc
agaccggggactcaacgtcccaccacggacaacttgattcaacaggactttgacgccatg
acacctgttgagttaaacaaaaactttataactgcctatcttcatgtacatggaaagttg
gttacgaaaatcgggatggagactttcgacgagagcgccacccagatgctggcccagttc
cgcgctctcctgcaccgacaacccttgcccactccagccgcgcggctcttgcagctcacg
gcgctcaacatgttcgccgtggagatgaataccgcgcccgctaaaggtaagaacgggaat
gaagagcgatcagcgtggctggaatgtgcgttgggcgtggctctgatgatgttcggagcg
ttgctcgaacgctgctgtgccctgctgccggagcccccgcagtctcagcagcacactgat
gccctgtcgctactgccggctattaaggtttggtctgactggatgttgtgtcacagcagt
gtatggaacccacctccctcatttgacaacttcggaacagaaagcgacaaggatccttgg
gattggatggccacattgatgaacatactcgaatcctacgacgacaagacgatccagttt
gaaagtgggccaaaagaaggctacgcaccagttcgcttggctgaagactcatcgctggcg
gggttcactccattgatgtacatggagccggcggtcgcgtgggtcagcagcgatccacct
cttccgcaccatgcggccgaacacgcgctaagaactagaaaactgctcttctttggaacc
gaatatctagttggagtggagccgcctgtgcttaagttggaatacccggcggactcccag
ccccggtacgtcagcgctgtacagaggacgattaccgactaccctccattacagcaattg
actgaaaaatcagaagatgagactaacccaagtggggaaatagacgaaccgaccggcaac
agcgaaggtgtagatgtggaaggtgctgatgaagtgactaagaggttgctgcggaggaaa
gaacagttggagtcgcggaacgccaccctggagaaacgtagacagcgaatgcaggagatg
ctgggcagtggcggcgcggcgccggaactggaggtgcggccacgcttcctggtgcccgac
accaactgcttcattgaccacctccacttgatccggacactctccgcacacaatccctac
aacatcgtcgtgcctctcgttgtgatgagcgagctggagggtctgtgccggtgcgctcgt
ctgggcggggcatgtcgcgacgcgctggcgtgggtggcgagcgcgggcccgagagtgagg
ctggcgaccgcgcgcggctcactgctggcgtcgcgtgccttcaccgcggagcaccaccgg
cccgccaccaacgacgaccgcgtgctggacacggcgctcaacctgcacgccaacctgacc
gacccagcagacacaaaagatgatggcgagaggaagacgcgtcgtgtttgcgaggtggtg
ctgctcactgatgaccggaacctgcgcgtgaaggccctggcggccgagctaccggcgcga
gacctgctctccttcatgcagtgggcgggcatcgcgagcgagcttcagaaacccgaagta
caaactataccaactcccaacgataccaagtaa
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