KEGG   Leptidea sinapis (Wood White): 126974044
Entry
126974044         CDS       T09272                                 
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    126974044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsin03000]
    126974044
   04121 Ubiquitin system [BR:lsin04121]
    126974044
   03036 Chromosome and associated proteins [BR:lsin03036]
    126974044
Enzymes [BR:lsin01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     126974044
Transcription factors [BR:lsin03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    126974044
Ubiquitin system [BR:lsin04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     126974044
Chromosome and associated proteins [BR:lsin03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    126974044
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     126974044
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JmjC Cupin_8 LRR_4 F-box JHD LRR_FBXL18 Rubredoxin PHD JmjC_2
Other DBs
NCBI-GeneID: 126974044
NCBI-ProteinID: XP_050677373
LinkDB
Position
31:2500516..2570524
AA seq 1010 aa
MSETLPNNKKQVSRQLRERKQRKLYSDEWALGDDEAEGGRGFSLADKLESPRFEHSGAVL
EMQGADLTISYLQKNGFTTPILFKDKAGLGLRVPTSNFTVNDVRMCVGSRRLLDVMDVNT
QKNIEMTMKDWQRYYDDPNKERLLNVISLEFSHTRLENYVQAPKIVRLIDWVETVWPRHL
KDQQTESTNALDDMMYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFWLIPPT
ERNLQLYEKWVLSGKQSDVFFGDTVEKCIRVHLQAGHTFFIPTGWIHAVYTPSDSLVFGG
NFLHQFGIEKQLNIAQVEDVTKVPQKFRYPFFTEMLWYVLDKYVSALLGRSHLAIEGHAP
PAAPADRVHLTLLELHGLKAIVVYLHQLPAARKSVPELLADPIALVRDVRTLVEQHRHDK
QALAVTGVPVLRGPDEGSGERVRQWSGRGARGGGRGGARPRPEHAGGAPRRRRTRCKKCE
ACQRTDCGECVFCHDMVKFGGLGRAKQTCIMRQCLQPMLPVTASCAVCHLDGWMQTPVAP
QAKGNSGRNGPSTLRECSVCYSIVHEGCVAAGGQLNEDLPNSWECPTCTSMGLTHDYKPR
HFRARQKSSDIRRMSVSSDASHISQNHSVQNRLPPPSSVPVKTENGSDSENKNDATIKTE
DTEINRDEDGNETHENAEGAERGENWEPVNKKRRASDEDEAPKKQALRAHLALQLTHHSA
KALKKPLYPVRPAPAPLTGHSGLWLDRRAMLSVFTKLTPHDLATCALVCKAWAEYSTDPS
LWRSMSFVQVRVSAAQLAGIARRQPLSLGLEWCHLARRQLAWLVARLPALRRLSLAGSPA
EAALALRCGACPPLVSLDLSFARGLDDAKLRGVLAPPESSRPGGGARGAEPSRLAQLAVL
RLPGTDITDVAMRYVVQALPKLEELDVSSCARLTDACAAQLGHHPLQRLSLAGCRLLTEA
ALDHLARCPDLVRLDLRHVPLVSTQAVIKFAAKSKHNLHVKDVKLVELRT
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgtcggaaacactgccaaataataaaaagcaagtttcaaggcagctgcgtgagcgcaag
cagcgaaaattgtattcggacgagtgggccctcggtgatgatgaagcagaaggtggtagg
gggttctccctcgctgacaaattggagagtcccagattcgagcactccggggcggtgttg
gagatgcagggcgcggatctcaccatctcttatctgcagaagaacggcttcacaactcca
attctgtttaaagataaagctggattgggtttaagagtgccgaccagtaacttcacagtt
aacgatgtgcgcatgtgcgtcggctcccgacgccttcttgacgtgatggatgttaacaca
cagaagaacatcgagatgaccatgaaggactggcagcgatattacgatgaccccaacaaa
gagagactgctcaatgttatttcattagagttctcccacacgcgcctggagaattacgtg
caggctccgaagattgtgagactcattgattgggtcgagacggtgtggccgagacaccta
aaagatcaacagactgaatctacaaacgctctcgatgacatgatgtacccgaaggtacag
aaatactgtttgatgtctgtcaaggggtgctacacggattttcacattgacttcggtggt
acgtctgtgtggtaccacattttgagaggggcaaaagtattctggttaattccgccgaca
gagcgcaacctgcagttgtatgagaagtgggttttgtcaggcaaacagtccgatgtgttc
tttggagatactgtggagaaatgcattcgagtccatcttcaggctggccacacattcttt
atcccgacgggctggatccacgcggtgtacacgcccagcgactccctggtattcggcggt
aacttcctgcatcagttcgggattgagaagcagctcaacatcgcgcaggttgaagatgtt
acaaaggtccctcagaagttccgttaccctttcttcacggaaatgctctggtacgtgctc
gacaagtatgtgagtgcgttgttgggacgatcgcacctcgctattgaaggacacgccccg
cccgccgcgcctgcggaccgcgtgcatctcacactgcttgagttgcatggactgaaggcc
atcgtggtgtacctgcaccagctgcccgcggcccgcaagtcggtgcccgagctgctggcc
gaccccatcgcgctggtgcgggacgtgcgcacgctggtggagcagcaccgccacgacaag
caggcgctggccgtcaccggcgtgcctgtgctcagaggtccggacgagggcagcggcgag
cgtgtacgccagtggagcgggcgcggcgcgcgcggaggcgggcgggggggagcgcggccc
cgccccgagcacgcgggcggcgcaccgcgcaggcgcaggaccagatgtaagaagtgcgaa
gcgtgccagcgtactgactgcggtgaatgcgtgttctgtcacgacatggttaagttcggc
gggctgggtcgggccaagcagacttgtatcatgaggcagtgcctgcagccaatgttacca
gtgacggcgtcatgcgctgtgtgccatttagatggatggatgcagacgccggtcgctcca
caggctaaaggaaactctggtcgcaacgggccgtccacgctccgcgagtgctcggtgtgc
tacagcattgtgcacgagggatgcgtagcggcaggcgggcagctcaacgaggacctgccc
aactcctgggagtgtcctacctgcacctccatggggctcacccacgactacaagccgcga
cacttccgcgcccgccagaaatcgtcggacatccgccgcatgagtgtcagttcggacgcc
agccacatcagccaaaatcatagtgtccaaaacagattgccgccgccatcatctgtcccg
gtcaaaacggaaaatggctcggacagcgagaacaaaaacgatgcgaccatcaaaactgaa
gatactgagataaatcgcgacgaagatggcaatgaaacacacgagaatgcggagggtgcg
gagcggggcgagaactgggagccggtgaataagaagagacgagcgagcgatgaggacgag
gcgcccaagaaacaggccttgcgcgcgcatctggcgctgcaactcacacatcactctgct
aaggcgctcaagaagccgctgtacccggtgcggccggcgcccgcgccgctcaccggccac
tcggggctgtggctggaccggcgcgccatgctgagcgtgttcaccaagctgacgccgcac
gacctggccacctgcgcgctggtgtgcaaggcctgggccgagtactccacggacccgtcc
ctgtggcgcagcatgtcgttcgtgcaggtgcgcgtgtccgccgcacaactggccggcatc
gcgcggcgccagccactgtcgctggggctcgagtggtgccatctagcacgccgccaactc
gcatggctggtggcgcgcctgcccgcgctgcggcgcctgtcgctggcggggtcgccggcc
gaggcggcgctggcgctgcgctgcggcgcgtgtccgccgctggtgtcgctggacctgtcg
ttcgcgcgcggcctggacgacgccaagctgcgcggcgtgctggcgccgcccgagagctcg
cggcccggcggcggcgcgcgcggcgccgagccctcgcgcctggcgcagctggccgtgctg
cggctgcccggcaccgacatcacggacgtggccatgcgctacgtggtgcaggcgttaccg
aagctggaggagctggacgtgtcgtcgtgcgcgcggctgacggacgcgtgcgccgcgcag
ctcggacaccacccgctgcagagactgtcgctggcgggctgccgcctgctcacagaggcc
gcgctcgaccacctggcgcgctgtcccgacctcgtgcggcttgatctccgacatgtgccc
cttgtatcaacgcaagcagtcatcaaatttgccgccaaatcaaaacacaacttgcacgtt
aaggatgtaaagctggtggagttgaggacctga

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