Leptidea sinapis (Wood White): 126976964
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Entry
126976964 CDS
T09272
Name
(RefSeq) TNF receptor-associated factor 6-A-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04013
MAPK signaling pathway - fly
lsin04120
Ubiquitin mediated proteolysis
lsin04140
Autophagy - animal
lsin04144
Endocytosis
lsin04214
Apoptosis - fly
lsin04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126976964
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
126976964
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126976964
04140 Autophagy - animal
126976964
09143 Cell growth and death
04214 Apoptosis - fly
126976964
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
126976964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126976964
04121 Ubiquitin system [BR:
lsin04121
]
126976964
Enzymes [BR:
lsin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126976964
Membrane trafficking [BR:
lsin04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
126976964
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
126976964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-TRAF
zf-rbx1
zf-RING_5
U-box
zf-Nse
RING_XB3-XBAT31
Sina_ZnF
zf-RING_6
TRAF3_RING
zf-RING_10
Prok-RING_4
zf-ANAPC11
Zap1_zf1
zf-P11
Sina_RING
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
126976964
NCBI-ProteinID:
XP_050681550
LinkDB
All DBs
Position
43:complement(7008291..7031129)
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AA seq
416 aa
AA seq
DB search
MDHKIKNALEGIAPMGISALNETVLSNQPESRYECPVCLNWLRDPVITTCGHKFCKKCIT
SWLQNSGHCPIDNINLSMKVDIFPDNYTKREIQEQRMSCPFAAKGCSVKVTPLDLDSHIS
TCEYNQPEASHQPDITIPCSFKAVGCKETFDNQEDLNNHLHNDILSHMSLLMNAYSEIKI
DNDISSASLDAKEQEAMSLWEAPDKNDNQTTTPALNNTSALIRALYERVVVLEQRNREQD
IVIANISKQLSAFAVAKMKQNNDMLLRYCMGNYIWKIDNFQARLDAMLKDHYKMLYSPGF
YTSPNGYRFCVRLNISPQNPQCFALHVHLMKTEYDDCLDWPFNGRIAFSMINQYNPELTQ
RDTMMSNSSLIAFRKPTAEICLRGFGYTEYALVSDVIRNGFVKDDVLIVKVSIRCV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcataaaataaaaaacgctttggaaggcatagcgcctatgggaatatcagcttta
aatgaaactgtgctaagtaatcaaccagaatcaagatatgaatgccctgtgtgtctcaat
tggttaagagatccagttataaccacttgtggacataaattctgtaaaaaatgtataaca
tcatggttacagaacagtggtcattgtcccatagacaatataaatcttagtatgaaagta
gacatatttcctgataattataccaaaagagagatacaggagcaaaggatgtcctgtcca
tttgccgctaaaggatgttctgtcaaagtgacacctctcgaccttgattctcatatatca
acttgtgagtacaatcaacctgaggcctcacaccaaccagacatcacaataccttgttct
ttcaaggctgttggttgtaaggaaacttttgacaaccaagaggatctgaacaatcattta
cataatgatatattaagtcacatgagtttgctgatgaacgcatattcggagatcaaaata
gacaatgatatatcgagtgctagccttgatgccaaggagcaggaggcgatgagtctctgg
gaggctcctgataagaatgacaaccagacaactactcccgctctgaacaacacaagtgca
ctcataagagccctctatgagagagttgtggtacttgaacaaaggaacagagaacaagac
attgtgatagccaatatatcaaagcaactttcagcgtttgcggtcgccaagatgaaacaa
aacaacgacatgttgttacgttactgtatgggtaactacatctggaagatcgacaacttc
caagcgaggctggatgccatgttgaaggatcattataaaatgttgtacagccctggtttt
tacacgtcacccaatggctatagattctgcgtccgcctcaatatctccccgcagaaccct
caatgtttcgcgctgcacgtccacctcatgaagaccgaatacgacgactgcctggactgg
ccgttcaacggtcgcatcgccttctccatgatcaaccaatacaacccggagctcacccag
cgcgacaccatgatgtctaactccagtctcatcgccttcaggaagcccaccgccgagatc
tgcctgagaggctttggttacacagagtatgcccttgtgagtgatgtgatcagaaatgga
tttgtcaaagatgatgtgctcattgtcaaggtaagtattcgctgtgtatga
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