Leptidea sinapis (Wood White): 126978888
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Entry
126978888 CDS
T09272
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126978888
Membrane trafficking [BR:
lsin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126978888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
126978888
NCBI-ProteinID:
XP_050683960
LinkDB
All DBs
Position
Z:complement(2710891..2818291)
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AA seq
2101 aa
AA seq
DB search
MAGYMSCNHHHLPDVSTKEYKGFSALMEAFSDTRDFVLPNDGREIIDINKTFFWPANDGI
RRGEVFMVRLLIHHLFMAPRVAGVYRLGLDRVVREGMINIVDSLLDNGNQCVPAFIEMDV
YLIIAIPMIVVEDADRENDNEEPQVLVVPEPQAGAAIPAVAEPPQAPEIRQVPGVAVPVR
RPRYRFFGSASSSRASSSQASPRGSDDQSGSDMDDTGLANIQRNIASVEQSFQAQRNDTI
IDMETDDEPPMSRIRSAGRRLLRRSSPARQDNKSPPDPPAQKKSTFKKVKNFMGLSKRRR
QGDKKDDEQGLIAGPSSQPDDQQSSHTDSSDEPQGASCVETPKSKKMRAAIQLAGPVALK
SADFQICITVIEARQLTGLNMDPVVCIQVGDQRKFTSVKESTNCPYYNEYFVFDFNMPPI
MLLDKIITLSVFHARHFLRANKLLGNFKLDVATVWNQTDRQFYHKWALLTDPEDMTAGPK
GYLKCDISVISKGDQLKIPPKSERDEDDIEANILLPDGVPIDRQRARFIVTIHKADGLPK
MDTSILANIKSAITGESNDIIDPYVQVCFAGMTGRTSVQKNCCSPAWNEEIIFTEMFPPL
CQRIMIQLRDNAPLHPSVIATHFIDLTNISNDGEKGFLPTFGPAYIYMYGSTRNCALLDQ
SANLNKGMGEGVSYRARMLISIRTEIIDSFDMPLSVVEVEQVQPINELSFEKHEEFFLFA
SIFDVNMIDKSFSDKSISFELSIGNAGNSLDGPYTSMRCPQDLECLDDLYADTGYWKSIT
PETKPSTSDKHYYYMPYWETKPCLHVRSIWPDHRRRLYNSNMLYYISEILEEGINDADQT
LKQNGSLDNTSLAALKSVMEVVSQHCKRYVEFMKNAPPTGKTRLDRERLKHCLHEIELLA
TQTRTLKAVITKSSVKDRIKTAVSYLDRMKALCEDPQHAMPDIFIWMISNGKRVAYQRLT
ARDLIYSDRSDEIGKLCGKMQTLFLKWPGKKATTPSGWTVPAKLDIYLWLGVVQDKRHFF
KGIPAGYDMRNDIMCADKLRVNPPSLIHYREKHKFQMRAYIYQARSLIGSDSSGLSDPFA
RVAISDCSASTEVIDETLSPTWDELLVIEDVLLYSTIEQIKNNPPVVSIEIFDQDKVGKS
EFIGRALARPHINSLNDEYAKPDFPPSLEWFSIYRGDEPAGELLATFELIEIPLKQGEPN
LPALPDAREPNGKPQVDPKKGPILPVPVGIRPTLSKYRIEVLFWGLRNLKRIHFLSVDKP
RVDIECAGHIIYSSIIQNAKRNPNFSNPVKYIDVELPDQDLYRPPLTIRVLDCRSFGRVT
LVGTHTINSIHKYMYTPQTKRDREIENRKKPLINLENIDLQTNRVVQDDIVYCSNNEQES
RPLLLDDIQDSAYYGTGAIPKRKLPGQTKRDIRRRRRSSTQSSMNDDETSKDWWSKYFAS
MEKMIEEEKENKKERHSSPQPTSFNIIDETTIQRDDAQTSQSNRTRRRTTISPKIKLNTI
VTVKDAIPASTLVKVHPHELEAVPEYEEFKDWLHSFDLYRGKKTGDDSEDENRIVGTFKG
ALKVYKWPLSNDLDYQSTLGFDPSNGFFQGVPSNEPIRVLVRIYIVKAMDLHPMDYNGKA
DPYIVLHLGSRRLSDKEHYQSKQLNPVFGRCFETEATFPHDSMLTIRILDWDLIGKDDLI
GETKIDLENRFYSRHRATCGLPIKYDEEGFNRWRDAMKPTQILAKLCKDAKLDAPHYEYG
YVKIGRTNFNMSMEDELFQNCCAVQEQMALNVLRRWYEIPIAGTHLVLDHIETRPLYNSN
KPGIEQGRLQMWIDMFPMDMPLPRSAVDISPRVPQSFELRVIIWNTDEVVLEDDEFFSGE
KMSDIYVKGWVKGTDDCQCTDIHYRSLTGEGNFNWRFIYPFEYLEAEEKIVSSRKESVFS
WDETECKIPARLELQVWDADHFSSDDFLGALTLDLNRFPRGAKTSKLCTLEMLKSDGSVP
MVNIFKQKRIKGWWPFYTKLDNEEMELTGKVEAEIHLLTREEADQMPAGLGRSEPEPLDK
PNRPDSSFIWFLNPLKSLRYILWHNYKWTIIRTLGVIGLALIIFIFIYAVPGYLAKKLLG
A
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttacatgtcttgtaatcaccaccatttgccagatgtatcaacaaaggaatac
aaaggcttctcagcgcttatggaagcatttagtgatactcgcgattttgtactaccgaac
gatggcagggagataattgatatcaataagaccttcttttggcccgcaaatgacggaata
cgaagaggggaagtctttatggttagactccttatccaccatctcttcatggctcctcgc
gtcgcgggggtctacagacttggcctggacagggtggtgagagaaggaatgataaacatc
gtggactccctattggacaacgggaaccaatgcgtgccggcattcatcgagatggacgta
tatttgattatcgccatcccgatgattgttgtagaagatgccgaccgagaaaacgataat
gaggaacctcaagtactggtggtacctgaaccacaagcaggggcagcgattcccgcagta
gcagaaccgccacaagcaccagaaatacgtcaagtaccaggagtggcagtgccagtccgt
aggccccgctatcgattctttggctcggcgagcagttcaagagcatcatcttcccaggcg
tctcctaggggttcagatgatcaatctggttctgatatggatgacactggcttggcaaac
atacaacggaacattgcaagcgtggaacaatcattccaggctcaacgaaatgatacgatc
attgatatggagacggatgacgaaccacccatgagcagaattagatcagcagggaggcgc
ctgttaagacggagctctccagcaagacaagacaacaaaagtccaccggatcctccagct
caaaaaaaatcaactttcaagaaggtgaagaatttcatgggattgagtaagcgtcgtcga
cagggagataaaaaagatgatgaacaggggcttattgctggtccttcttcccagccggat
gaccagcaatcatcccacactgattcatcggatgaaccgcagggtgcctcctgtgtggaa
actcctaaatccaaaaaaatgcgagccgcaattcaactagcaggtccggtggctttgaaa
tcggctgattttcaaatctgcatcacagtgatagaagcgcgtcagcttactggtctcaac
atggacccagtcgtctgcatccaagttggagatcagcgtaaattcaccagcgttaaagag
agcactaactgcccatattataatgagtacttcgtcttcgatttcaacatgccaccgatt
atgctcttggacaagattattacactttcggtgtttcatgctcggcatttcttgcgagcc
aacaaacttttgggaaattttaagctggacgtcgcaacagtatggaatcaaacagaccga
cagttctatcacaagtgggctctcctcacggatcctgaggatatgacagctggtcctaag
ggttacctaaaatgtgacattagtgtcattagtaagggcgatcaactgaaaatcccaccg
aaaagcgaaagagatgaagacgatattgaagcaaatatactgcttccggatggtgtacca
atagatcgacaacgtgccagattcattgtgacaatacataaagcggatggtcttccaaaa
atggacacttcaattttggctaacataaaaagtgcaataactggtgaaagtaatgacatt
atagatccttatgtgcaagtatgcttcgctgggatgacgggaaggacgtcagtgcaaaag
aattgctgcagccctgcgtggaatgaggaaatcatatttaccgaaatgtttccgcccctt
tgtcagcggatcatgattcagttgagagacaacgcaccactacacccgagcgttattgct
acacactttattgacctaacaaatatatctaacgatggcgagaaaggttttttaccaaca
ttcggccctgcatacatctatatgtatggttctacccgaaattgtgctttactggaccaa
tctgccaacctcaacaaaggaatgggggaaggagtttcatatcgagcaaggatgttgatc
tcgatacgcacagaaataattgatagttttgacatgcctttatcggtagttgaagttgaa
caagtgcaacccatcaacgagctctcattcgagaagcatgaggagtttttcttgtttgcg
agtatatttgacgtcaacatgattgataaaagcttctctgataagtccataagttttgag
ctgagtattggcaacgctggcaactctttagatggaccttacacgtcgatgaggtgtcct
caagacttggagtgcttggatgatctatatgctgatacaggatattggaaaagtataaca
ccagaaactaagccatccacaagcgataaacattattattacatgccctactgggaaacc
aagccttgtttgcatgtccgcagtatttggccggaccatagacgtcgattatacaactct
aacatgctttattacataagtgaaattttggaggaaggcattaatgatgctgaccaaaca
ttaaaacaaaatggaagtctcgacaacacctcactggcagctctaaaatctgttatggaa
gtcgtatcgcaacattgcaagagatatgttgaattcatgaagaatgctccacccaccggg
aagaccagacttgaccgcgaaaggctcaagcattgcttacatgaaattgaactactggca
actcaaactcgaacgcttaaggctgttataaccaaaagttcagtgaaagatcgcataaaa
acagcagtttcgtatttggatcgaatgaaagccttgtgcgaggatccacagcacgcaatg
cctgatatatttatctggatgataagcaatgggaaacgggttgcatatcaacgtctaact
gcccgggatttgatttattccgatcgatcagacgagatcggaaaactctgtggcaaaatg
caaactttatttctaaagtggccaggaaagaaggctaccacgccaagtggttggacagta
cctgctaaacttgatatatacctttggctgggcgtggtgcaagataaaagacattttttt
aagggtatacccgctgggtatgatatgcggaatgacattatgtgtgcagacaagctgcgc
gtaaatcccccatcgcttatacactaccgtgaaaaacataaatttcaaatgagagcatat
atatatcaagcaagatcgctgattggatctgattcctcaggactatcagatccgtttgct
agagttgccattagcgactgttccgcgtcaacagaagtgatagacgagactctaagcccg
acttgggatgaattattagttattgaagatgttcttctttacagtacaatagagcaaata
aaaaacaatcctccagtagtatccatagaaatttttgatcaagataaggttggcaagtcg
gagttcattggtcgcgcattagcaagaccccacattaattccctaaatgacgaatatgca
aagccagactttccaccttctctggaatggtttagcatatatcgtggtgatgaacccgcg
ggagaactcttagcaacgtttgaacttatcgagataccacttaaacaaggcgaaccaaac
ctgccagcgcttccagatgctagagaaccaaatggaaagccacaagttgatcctaaaaaa
ggccccatattacctgtgccagtgggtatacgtccaactttatcaaagtaccgaattgaa
gtgctgttctggggcttgagaaatttgaaacgtattcattttctttctgttgataagccg
agggtagatatagaatgtgccggccatattatatattcttccatcatacaaaatgcaaag
cgcaatcccaacttttctaaccctgtaaagtatatagacgttgaattacctgatcaagat
ctttatagaccacctttaactattagagttctagattgccgaagctttggtagagttact
ctagttggtactcatactatcaactctatacacaagtatatgtacaccccccagaccaaa
cgagaccgtgaaattgaaaatcgcaaaaaaccattaatcaatttagaaaatatcgattta
caaacaaaccgcgtcgtgcaggatgacattgtttattgcagtaataatgagcaggaaagc
cgtccactgcttttagatgatattcaagatagtgcctactatggaactggggctatacct
aagcgcaaattaccaggccagactaaaagagacatcagaagaagaaggcgatctagtaca
cagtcgagtatgaatgatgatgagacaagcaaggattggtggtcgaaatatttcgcatct
atggagaaaatgattgaagaggaaaaggaaaataaaaaggagagacacagctcaccacag
cccacttcgtttaatattatagatgaaactactattcaaagagatgacgctcagacttcc
caatcgaataggactaggcgaagaacaacaatttcaccaaagataaaacttaatacaata
gttacagttaaagatgcaattccagcgtctacattggtgaaggtccatcctcatgaatta
gaagctgtacctgagtatgaagaattcaaagattggcttcattcgttcgatttgtaccga
ggtaaaaaaactggtgatgattctgaggacgaaaaccgcatcgttggaactttcaagggt
gccttaaaagtttataaatggccactatctaatgatctcgattatcaatcaacattggga
tttgacccaagcaatggattctttcaaggagttccaagtaacgaaccaattcgtgtactt
gttagaatatatatagtgaaagctatggacttacaccctatggattataatgggaaggcc
gacccttatattgttttacatcttggatcacgcagattaagtgataaagagcattatcag
tcaaaacaactaaatccagtgtttggcagatgtttcgaaacagaagctacatttccacat
gattcaatgctcacaataaggattctcgactgggatttgattggaaaagatgatttaatt
ggtgaaactaaaatcgatttagaaaatagattttatagccgacatcgagctacatgtgga
ttaccaatcaagtatgatgaggaaggatttaatcgatggcgggacgcaatgaaaccaaca
caaatcttggctaagctttgtaaagatgctaaattagatgcaccacattatgagtatggt
tatgttaagatcggacgaacaaattttaacatgagcatggaagatgaactatttcagaat
tgttgtgcggttcaggaacaaatggcactaaatgtgctgcgtcgttggtatgagatccca
atagcaggaacccatcttgttttggaccacatagaaacccggcctctgtataattctaat
aagcctggaattgaacaggggcgtctacaaatgtggatagatatgtttccaatggatatg
cctcttcctagatcggcagttgatatatcaccacgagtaccacagtcgtttgaattgcgg
gttataatatggaatactgacgaggtggttcttgaagacgatgaatttttttcgggtgaa
aaaatgtcagacatctatgtgaaaggatgggtcaaaggcacggatgattgtcagtgtact
gacatacactaccgatcattgactggtgagggaaattttaactggcggtttatttatccc
tttgaatatttggaggctgaagagaaaattgttagctcccgaaaggaatccgtattttct
tgggatgaaacagaatgcaaaatacccgcacgtctcgaattgcaagtttgggacgctgat
catttttcttccgatgatttcttaggcgcactaacattagacttaaatcgattccctcga
ggggctaagacgtccaagctttgcacattggaaatgttaaaaagtgatggttctgtgccg
atggtgaatatatttaaacaaaaacgcataaaaggctggtggccattttatactaaactt
gataatgaagaaatggaactaactggcaaagtagaggcagagatacatctactgacacgt
gaagaagcagaccaaatgccagctggactaggaagaagcgaaccagaacccctggataaa
ccaaaccgaccagactcgtcattcatatggttcttgaacccactaaagtctttgaggtac
attctatggcacaactacaagtggaccattattagaaccttgggcgttattgggttagcc
ttgatcatttttatttttatatatgcagtaccaggctaccttgctaagaaactgttggga
gcttga
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