Leptothermofonsia sichuanensis: J5X98_21985
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Entry
J5X98_21985 CDS
T07904
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk01501
beta-Lactam resistance
lsk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5X98_21985
01503 Cationic antimicrobial peptide (CAMP) resistance
J5X98_21985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsk03036
]
J5X98_21985
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsk02000
]
J5X98_21985
01504 Antimicrobial resistance genes [BR:
lsk01504
]
J5X98_21985
Chromosome and associated proteins [BR:
lsk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J5X98_21985
Transporters [BR:
lsk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J5X98_21985
Antimicrobial resistance genes [BR:
lsk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J5X98_21985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
YqfD
Lebercilin
DUF3584
WEMBL
UPF0242
RnfC_N
CCDC93_CC
GAS
Motif
Other DBs
NCBI-ProteinID:
QZZ19938
LinkDB
All DBs
Position
5080870..5082288
Genome browser
AA seq
472 aa
AA seq
DB search
MFPPVLRHRKTSGTVGWLLLAGSLVVLTGCGSTRAEAESRPRAGQPGAASQAPAAVNVAI
AREGTVREQREYTGTTQPFRLVSLRSQVEGQVLDLSVDVGDAVQQGQILARIDGAVLSTN
VAEAQAEVAARQSEVAQARIAVSDAQTQVNRARAELQQAQSDLNRLQFLGSQGAIPEQQV
EQARTRVSTAQATLQSAQEQVRTRQQAVEAAQGRVSAQQAVVAREQERQSYTTLTSPVTG
SVVEQTTEAGNLVQPGGEVLRLGDFSQVKVAVQISELELGNIRPGQSVQVRLDAFPDQTF
TGQVSRISPAADPVARLVPVEVTVPNTSGRIGSGLLARVTFNQQTNRSRIVVPEVALQAG
ENQRGGPPRNAGNQAQAGGNSSNSQGGRQPRPVAAGTNQARGVGTLFIVEGTGNEATVAA
RQVTLGRRGDGQVEVLSGLQPGERFVARSSRALKNGDSVRLSILSEQAEHSN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcctgtattgaggcatcgaaaaacttctggcacggttggatggctgcttctg
gcggggtcgctggttgtgctgacggggtgcggcagcaccagagcagaggcagaatctcgc
ccgcgggcaggacagccaggggcagcttcccaggctccggcggcggtgaatgtggcgatc
gcccgcgaagggactgtgcgggagcagcgagaatatacgggaacaacgcagccgtttcgt
ctggtgtctttgcgatcgcaggtggagggacaggtgcttgacctgagcgtggatgtgggt
gacgcggtgcaacagggacagattttagcccgcattgatggggcggttctgtctaccaac
gtggcagaggctcaggcagaagtggccgcccgccagtccgaagttgcccaggcgcggatt
gcggtcagtgacgcccagacccaggtgaatcgggcgcgggcagaactgcaacaggcccaa
tctgacctgaatcgattgcaatttctggggagccagggggcaattccagagcagcaggtg
gagcaggcccggacgcgggtaagtacggcgcaggcgaccctgcaatcagcccaggaacag
gtacgcacccgtcagcaggcagtagaagccgcccagggcagggtttctgcccagcaggca
gtggttgcccgggaacaggaacggcagtcctacaccacgctgacttctccagtgacggga
tcggtggtggagcagaccacagaagcgggaaacctggtgcaaccgggtggggaagtttta
aggttgggggatttcagtcaggtcaaagtggcagttcagatttccgaactggaactgggt
aacattcgtcctgggcaatctgtccaggtccggttagatgcctttcctgaccagaccttt
accgggcaggtgtcacgcatttccccggcggcagatcccgttgcccgcctggtgccagta
gaagtcaccgttcccaacaccagtgggcgaattggcagcggattgctggcacgggtgacc
tttaaccaacagaccaaccgatcgcgaattgtggttcctgaagtcgccctccaggctggc
gaaaaccaacgtggtgggccgccgcgaaatgccgggaaccaggcacaggcagggggcaac
agcagcaatagccaggggggtagacagccccgaccagtggcagcgggaaccaaccaggct
cgtggcgtcggcaccctgttcattgtggagggcacgggcaacgaggcaaccgtcgctgca
cggcaggtcaccctgggtagacggggcgatggacaggtcgaggtgctttcagggttgcag
ccaggagaacgctttgtcgcccgcagcagccgggcactgaaaaatggcgacagtgtgcgg
ttgagcattctgtctgaacaggcagaacactcgaattag
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