Leptothermofonsia sichuanensis: J5X98_24075
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Entry
J5X98_24075 CDS
T07904
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk01501
beta-Lactam resistance
lsk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5X98_24075
01503 Cationic antimicrobial peptide (CAMP) resistance
J5X98_24075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsk03036
]
J5X98_24075
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsk02000
]
J5X98_24075
01504 Antimicrobial resistance genes [BR:
lsk01504
]
J5X98_24075
Chromosome and associated proteins [BR:
lsk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J5X98_24075
Transporters [BR:
lsk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J5X98_24075
Antimicrobial resistance genes [BR:
lsk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J5X98_24075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
CCDC22_CC
DUF745
Biotin_lipoyl
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QZZ20302
LinkDB
All DBs
Position
complement(5579478..5580854)
Genome browser
AA seq
458 aa
AA seq
DB search
MSSSKTSAQTLSDLLAHGQSGLQIVVPFILGGVALATLSSCGSLPEGGADARQAGAARNP
GPTPVDVAIARPAPLSQVREYTGTTQPLREVSLRAQIDGQVLRLTVDVGDRIRQGQTLVQ
IDDAIPRALVANAEAELAARQSEVSRLKTQVSEATTRVEQARLQLQQAEADAARLEGLAQ
DGVSSQQRAEQARTEARTAAQVLRSAQEQVRNQQEAIVAAERRVNAQRALVAQARERRSY
AMVNSPLTGSVIARTTEIGNLVQPGTELLKLGDFSQAKVTVQVSELELTKVRLGGKAQVR
LDALPNQKLVGTVTRVSPAADPTSHLVPIEVTIPNSGGKIGSGLLARVSFEQPQVTTIVV
PLTALQSDRTQKSQKSGPSGSPNPGRQGKPPQQEGLLFVINPESEPPTVISRSVKLGNQG
DGRVEILSGLKSGERFVVRSGRPLKDGETIKQSILSEQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccaagacttctgcacaaaccttatcagatttacttgcccacggtcagtca
ggcttacagatagtggttccatttattttgggaggggtggcactggctaccctttcaagt
tgcgggtcattgcctgagggaggagcggatgcccggcaagcaggagccgcccgcaatccg
ggaccaacccctgtggatgtggcaatcgccagacctgctccgctcagccaggttcgcgaa
tataccggcacaactcaacccctgcgggaggtttcccttcgcgctcaaattgacgggcag
gtattacgcttgactgtggatgtgggcgatcgcatccgtcagggacaaaccctggttcaa
attgatgatgcgataccacgggcactggttgccaatgcagaggctgaactggctgcccgt
cagtcagaagtatctcgcctgaagacccaggtcagcgaagcaaccacacgggttgagcag
gcaaggctgcaactccagcaggcagaagccgatgctgcccgtttggaaggattggcccag
gatggagtctccagtcagcaacgggcagagcaggcacgcacggaagcgaggacagccgct
caagtgttgcgatcagcgcaggaacaggtccgaaaccagcaggaagcgattgtcgctgcc
gagcgtcgggtaaatgcccagcgagcactggttgcccaggcacgagaacgtcgttcctat
gcaatggtcaactctcccctgaccgggtcggtgattgcccgtaccactgaaattgggaac
ctggtgcaacccggtacagaactgttgaaactgggagacttcagtcaggcaaaagttact
gttcaggtatcagaacttgaactgacaaaggtcagattgggaggcaaagcacaggtacgg
ctggatgctttgcccaaccagaaattggttgggactgtcacccgtgtttcgcccgctgct
gaccctacctcgcatctggttccgattgaggtgacgattcccaactcaggggggaaaatt
ggcagtggcttgctggcacgggtcagctttgagcaaccacaagtaaccaccattgtggtt
cctctgactgcactccagtcagaccggacgcagaaaagccagaagtctggaccttcaggg
tcgcccaacccaggcaggcagggcaaaccacctcagcaagaggggctgttgtttgtaatc
aatccagagagtgaaccgcctacggtgatttcgcgatcggtgaagttgggcaatcaaggg
gatggtagagtcgaaattctgtctggcttaaagtcaggtgaacgatttgttgttcgcagt
ggcagaccgctcaaagatggagagacaattaaacagagtatcctgtcggagcaatag
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