Lepeophtheirus salmonis (salmon louse): 121114701
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Entry
121114701 CDS
T08214
Symbol
mle
Name
(RefSeq) dosage compensation regulator mle isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121114701 (mle)
03012 Translation factors [BR:
lsm03012
]
121114701 (mle)
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121114701 (mle)
5.6.2.6 RNA 3'-5' helicase
121114701 (mle)
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121114701 (mle)
Translation factors [BR:
lsm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121114701 (mle)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
ATPase
AAA_19
nSTAND3
NACHT
Motif
Other DBs
NCBI-GeneID:
121114701
NCBI-ProteinID:
XP_071743283
LinkDB
All DBs
Position
3:23133355..23138564
Genome browser
AA seq
1378 aa
AA seq
DB search
MDVNDVKAFLYSWLGKRKITPDYSIRPAGSKVKPRFLCELRVEGHDYVACGNSTNKKDAQ
SNSAKDFIMYLCRNGHLKDDEVPSGLTEAAVPVPNSNVYTNLGLSQRPVFQPGFGPNSLG
EAYHPVGKNNESLSSFKQEFLDKVNKQQMDAQEEIDVNSGIHGNWTMENAKSMLHQWMQS
NKIRSDYKYHPAGPDHNRSFVAEMNIYVKELRRNIQAREAGSNKQSASKNCALSLVRQLF
HLGVIGPFSGTLKKKESSNAPVFNVTVDPKIVDDIQDTLSSIDFSPIDVSSLKDQITEDN
PLNLISNSDFVNDLLPASTITKGGVVSWCPPKPNWNPWQACNIDEGPLASASMDQISEDI
LQSWGESQKVSSDVQAQNKARSALPIFDMKNEILGAIYDNPVVLIRGNTGCGKTTQVCQF
ILDDYIQSGQASLCNIVVTQPRRISAVSVADRVASERCEELGVTAGYSVRFESVLPRPYG
SIFFCTVGVLLKKLESGLRGVSHVIVDEIHERDVNTDFILVVLRDMIHTYPDLRVILMSA
TVDTTLFAKYFNQCVVVEVPGSAYPVQDYYLEDCIQMTNFIPSLPPRKNKKDEDDCGEEA
DDVDITNNISNEYSEQTKKVLKTMGDKEINFELIGALMQYIDGLNIQGAVLIFLPGWNTI
FALMKWLQDHPVLGGPKYSIVPLHSQLPREDQRRCFDHVPDGVTKIILSTNIAESSITID
DVVYVIDSCKVKMKLFTSHNNMTNYATVWASKTNLQQRKGRAGRVRPGFAFHLCSRARYE
SLEEYMTPEMFRTPLHEISLSIKLLRLGSIGQFLSKALEPPPIDAVIEAEVLLREMKCLD
NNDELTPLGKILARLPVEPRLGKMLIFGCIFSCADALCTIAAQASCGAELFITELTRGRL
NFQQRSFSGCRFSDHIAALNAFNQWEEAKEYGERSETGFCDQKGINISTMRVTADAKSQL
KDLLIKAGFPEECMIPQCYNFSGPDGKLDVVIALLIMGLYPNICMHKEKRKVLTTEARTA
LVHKSSVNCSKEAIEFPLPFFVFGEKIRTKAVSCKKMTMVSPVHLILFGCKKIELHQNEV
VRMDNWINLNVNPQYVAMITALRPCIDILIIHASSDPEDIKELVHREEKVIQMFQKLCRV
TEIGQFPSHGNRKMNRNYNSDDGPPAKRGGYAKSFGRGHSSGGLFGNNTSTGRSDNMNDT
GGQWNSNRGGGMMGGRNSSGGGRGSLGSNFSRGGSFGGNFSRGGSFGGNFGSGGGSYGGN
LDRRGGGSYSGTSGRGGGSSFGGNLGRGGGNSFGGNFARGRGTSGWGYNSYRGGSSESFG
SMNNYPQQNDNFSRSNNGDRDFSGNFNSRRDDGGQSFGRGFSNSYSGGGGNRGYGGGY
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaatgacgttaaagcatttctctacagttggcttgggaagcgtaaaataacc
ccagactacagtataagacctgctggatccaaagttaaaccacgatttttatgtgaactt
cgggtagaaggtcatgattacgttgcatgtggtaactcaactaataaaaaggatgctcaa
tcaaattctgccaaggattttattatgtatctctgtcgaaatggtcatttaaaagatgat
gaagttccgtcaggtttaacagaagctgctgtgccagtgccgaattcgaatgtttataca
aatttaggactttcacaacgtcctgtttttcaaccaggatttggacctaattcccttggt
gaagcctatcatccggttggaaagaataatgaatctttatcttcctttaagcaagaattt
cttgacaaagttaataagcaacaaatggatgcccaagaagaaattgatgttaattctggt
attcatggtaattggaccatggaaaatgcaaagtctatgctccatcaatggatgcaaagt
aataaaatacgatctgactataaatatcaccctgctggtccagatcataatcgttctttt
gttgctgaaatgaacatatacgtcaaagagttaagaagaaatattcaagctcgagaagct
gggtctaacaaacaatctgcttcaaaaaactgtgcactttctctggttagacagttgttc
catttaggagtaattggtccattctcgggaactctaaaaaagaaagaatcttccaacgca
cctgtatttaatgtcacagtggatcccaaaatagtcgatgacatccaagatactctgagt
tctatagatttcagtccgatagatgtatctagtctaaaagatcaaatcactgaggataac
cctttgaatcttatttctaattcagattttgtcaatgatctcttacctgcatctaccata
accaaaggaggggttgtttcttggtgtcctcctaaacccaattggaacccttggcaagca
tgtaatattgatgaagggcctctagctagtgcatctatggatcaaatttcagaagatatt
cttcaatcatggggagaaagccaaaaagtgagctctgatgttcaagcacagaataaagct
cgttctgcattgccaatctttgacatgaaaaacgaaatacttggtgccatttatgataat
ccagttgtccttattcgaggtaataccggctgtggaaaaacgacacaagtttgccaattt
attcttgatgactatattcagtcaggacaagcttcgttgtgtaacattgtagttacacag
cctcgaagaatatcggcagtctcagttgccgatcgagttgcaagtgaacgatgtgaagaa
ttgggagttacggcaggctatagtgtacgatttgaatctgttttaccgagaccctatggt
tctatctttttctgtactgttggggttctattaaagaaacttgaatcagggctgaggggt
gtatcccatgtaattgttgacgaaatccatgaacgagatgtgaatacggattttatttta
gtggttcttcgtgacatgattcatacatatccagacttacgggtaatactcatgtcagcg
actgtggacaccactctctttgctaaatattttaaccaatgtgttgttgttgaagtacct
gggagtgcttatcctgttcaggattattacttggaagactgtattcagatgacaaatttt
attccctcacttccgccacgaaaaaacaagaaggatgaagatgattgtggggaagaggct
gatgacgtcgacatcacaaacaatatttctaatgaatattcagaacaaaccaaaaaagtt
ttaaaaacgatgggggataaggaaattaattttgagcttattggggctctaatgcaatat
attgatggactcaacattcaaggagcagttttaatttttcttcctggttggaacacaata
tttgctctcatgaaatggctccaggatcaccctgtacttggaggccctaaatattcaatt
gttcctcttcattctcaattgcctcgtgaggaccaacgtcgttgttttgatcatgttcct
gatggagttacaaaaataatattgtcaactaatattgcagaatcatctattactattgat
gatgtagtttatgtaatcgactcttgtaaagtaaaaatgaaactttttacatctcataat
aatatgaccaactatgcgactgtttgggcctccaagacaaatttacaacaacgtaagggt
cgagcaggtcgtgtgcgtcctggttttgcatttcatctttgttcaagagccagatacgag
tctttagaagaatatatgacgcctgaaatgtttcgtactcctcttcacgaaatttcatta
agtataaagttactcaggcttggatctattggacaatttctgagtaaggctctagagcct
cccccaattgatgctgtaattgaggcggaagttcttctcagagaaatgaaatgtcttgac
aataatgatgaacttactcctctgggtaagatattagctcgtttgcctgtggaacctcga
ttaggaaaaatgttgatattcggatgcatattttcatgtgctgatgcactttgtactatt
gcggctcaagcatcttgtggagctgaactgtttattaccgaattaaccagaggtaggttg
aattttcaacagcgatcgttttctggatgtcgattttcggatcatattgctgccctgaat
gcttttaatcaatgggaagaagctaaagaatatggagaacggtccgaaacaggtttctgt
gaccaaaaaggcatcaatatatctactatgagagtcacggcagacgcaaagtctcaactc
aaagatcttttaattaaagctggatttccggaggaatgtatgatacctcaatgctataat
ttctctgggcctgatggaaagttagatgttgtcattgctcttcttatcatgggactttat
cctaatatatgtatgcataaagaaaaacgaaaagtcttaacaactgaagcgagaacagct
cttgtccataaatcttcggtgaattgttctaaggaagctattgaatttccactacctttc
ttcgtctttggagaaaagatacgtacaaaagccgtaagttgcaaaaaaatgaccatggta
agtcctgtccatttaattctatttggatgcaaaaaaattgagttacatcaaaatgaagtt
gtacgaatggataattggataaatttaaatgtgaatcctcagtatgttgctatgattact
gcattaaggccttgtattgatattctaataattcatgcatcatctgaccccgaagacatt
aaagagttagtgcatcgggaagaaaaagtcattcaaatgtttcaaaaattatgtcgtgtt
actgagattggtcaattccctagtcatggcaatcggaagatgaatcgtaattacaatagt
gatgatggaccaccagccaaaagaggtggctatgcgaagtcatttggaagaggccattct
tcgggaggattatttggaaataatacgtcgacgggtaggtcagataatatgaatgatact
ggtggccaatggaatagtaatcgaggaggtggtatgatgggaggtcgtaattctagtgga
ggaggtcgaggttcccttggtagtaattttagccgtggaggttcctttggtggaaatttt
agccgtggaggttcttttggtggaaattttggcagtggaggaggttcctacggtggaaat
ttagaccgtaggggaggaggttcctacagtggaacttcaggccgaggaggaggaagctct
tttggtggaaatttaggccgtggaggaggaaattcctttggtggaaattttgcacgtgga
agaggtacttctggctggggttataattcctatcgaggtggtagtagtgagtcctttgga
agtatgaataattatccacagcaaaatgataacttttcaagaagtaataacggagatagg
gatttctcaggtaatttcaattcacgaagggatgacggaggtcaatccttcggtcgaggt
ttcagcaatagctatagtggtggtggtggaaacagaggttatggtggaggctattaa
DBGET
integrated database retrieval system
