Lepeophtheirus salmonis (salmon louse): 121114760
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Entry
121114760 CDS
T08214
Name
(RefSeq) actin, muscle
KO
K05692
actin beta/gamma 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
lsm04145
Phagosome
lsm04814
Motor proteins
lsm04820
Cytoskeleton in muscle cells
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121114760
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121114760
09142 Cell motility
04814 Motor proteins
121114760
04820 Cytoskeleton in muscle cells
121114760
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121114760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121114760
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121114760
03036 Chromosome and associated proteins [BR:
lsm03036
]
121114760
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121114760
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121114760
04147 Exosome [BR:
lsm04147
]
121114760
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121114760
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
121114760
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121114760
NuA4 complex
121114760
Chromatin remodeling factors
BAF complex
121114760
PBAF complex
121114760
GBAF(ncBAF) complex
121114760
SWR1 complex
121114760
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
121114760
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121114760
Exosome [BR:
lsm04147
]
Exosomal proteins
Proteins found in most exosomes
121114760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
121114760
NCBI-ProteinID:
XP_040564751
LinkDB
All DBs
Position
3:25221565..25222979
Genome browser
AA seq
376 aa
AA seq
DB search
MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPVEHGIITNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPLNPKANREKM
TQIMFETFNMPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRID
LAGRELTNYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAAASSSLEKS
YELPDGQVITIGNERFRSPEALFQPSFLGMESCGVHETCYNSIMKCDVDIRKDLYANTVM
SGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDECGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgaagacgttgctgcattagttgtcgacaatggatccggtatgtgcaaagcc
ggattcgcaggagatgatgctccaagagccgtctttccctccatcgttggaagaccacgc
catcagggtgtgatggtgggtatgggtcaaaaggactcctatgtaggagatgaagcccaa
tccaagagaggtatccttactttgaaataccccgttgagcacggcatcatcaccaactgg
gatgacatggaaaagatctggcatcacaccttctacaatgaactccgtgttgccccagaa
gagcaacctgtcctcctcacagaagctcctcttaaccccaaggccaacagagaaaagatg
actcaaatcatgtttgagaccttcaacatgcccgccatgtatgtagctatccaagctgtc
ctctccctctatgcatctggtcgtaccactggcattgtactcgactctggagatggtgtc
tcacacaccgttcccatctacgaaggttatgcacttccccatgccattcttagaattgat
ttggctggtcgtgagttgaccaactacttgatgaaaatcctcactgagagaggttactcc
ttcacaaccactgctgagcgtgaaatcgttcgtgacatcaaggaaaagctctgctatgtt
gcccttgattttgagcaggaaatgtcaactgctgccgcttcttcctccttggaaaagtct
tatgaattacctgatggacaagttatcaccattggcaatgagcgcttccgctctcctgaa
gccctcttccaaccttctttcctgggcatggaatcctgtggtgttcacgaaacctgctac
aactctatcatgaagtgtgatgtagacattcgtaaggatctatatgccaacacagtcatg
tctggtggtaccaccatgtaccctggtattgctgatcgtatgcaaaaggaaatcacggcc
ttggcaccatctaccatcaagatcaaaatcattgcacctccagagagaaagtactccgtc
tggatcggaggctccatcctggcttccctctctacctttcaacaaatgtggatctccaaa
caagaatatgatgaatgtggtccatccattgttcacagaaaatgcttctaa
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integrated database retrieval system