Lepeophtheirus salmonis (salmon louse): 121118205
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Entry
121118205 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08558
nuclear receptor subfamily 4 group A member 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121118205
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsm03310
]
121118205
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
121118205
Nuclear receptors [BR:
lsm03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
121118205
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121118205
NCBI-ProteinID:
XP_040568687
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Position
5:70870152..70991022
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AA seq
853 aa
AA seq
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MDEEGVVTFETNHTFVLTPDPWHPGLNLVEDFSIQGNSESKVILQSSSDNPSSPSGLQQS
THPSSNSSTPQQQTNIQQLHRSSASNNGGVHSSTAMLLLQHQQQSIHHHHNIHHSSSSNI
NASTHGSQQTSAQQQSNFGSSSSGSSATFADVLSSSYGISLTDYGDEGDLNPGSSHHGLI
ESLGGNYGSANPALGHHPQQQVAPAAQHHHHPGHHPQQQQHHHHHGESSYESYDSIPNTF
HGEFITQPIDYQGARGRSSPPTGPLVPPPSSSSNAGSPVTHSPGPIIVPSSPSHLLPSFL
DTYNRQQYEQQQQQALQQQQAQQQHQQVVGVPQPTTLEPRYPFKTELPEAKPICSTFPPP
PPSCSSPSSTPTTSSSAFTSPPYQTGGGSNFLLKKEPIYTCTTAFVPNIAPNSPYQSNSS
TNYYHSPSSPSYFSSSSANNTASGSSNNPPTNNFDRPIVARKTSAPRASTSTSQGSGDAV
SKLSIRVPLGPPPPSLSSECSPNKASLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKN
AKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPTE
SPPSPPVSLITALVRAHIDTSPDMNNLDYSQFVETSIEDERDSKENMLANEAIKIGQFYH
VLTSSIEVIRNFCERIPGISELSLNDRDLLFQTSCLELFVLRLAYRSNPDSDRYTFCNGV
VLHVSQCEQTFGDWLNGINEFARGLHSMELDISAFSCLCGLILVNGKDERHGLSDPKKVE
SIENKIINSLKDHVTYNPEAQKKEHYMTRILDRLPALRSLSMQGLQRIFFLKWEDLVPAP
PLIEKMFASSIPF
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaaggagtggtgacatttgagacgaatcacacatttgttctaacaccggat
ccttggcatccaggactgaatcttgttgaggatttttcgattcaaggaaactccgagtca
aaagtcatcctgcaatcatcttctgataatccatcaagtccttcgggccttcaacaatcc
acacatccttcaagtaattcttctacgccccagcaacagacaaatattcaacaacttcat
cgctcaagtgctagtaataacgggggtgttcactcttccaccgccatgttgttactccag
catcagcaacaaagtattcatcaccatcacaatatccatcacagtagcagcagtaatatc
aatgcctcaacccatggttcacaacaaacctcagcacagcagcaaagtaattttggatcg
tcctcctcgggatcctcggccacatttgcagatgttctctcctcaagctacggaattagt
ttgacagactatggagatgagggagatctcaaccctggatccagtcatcatggtttgatt
gaatcccttggtggtaattatggaagtgctaatccggctttagggcatcatcctcagcag
caggtagctcctgccgcgcagcaccatcatcatccaggacatcatccccagcaacaacaa
caccatcaccaccatggagagtcctcctatgaatcctatgattccatcccaaacacattt
cacggagaattcattactcaacctattgactatcagggggctcgagggcgatcatctccg
cccactggaccacttgttccacctccttcctcctcctctaatgcaggctctcctgtcacc
cattcgcctggacccatcatagtaccctccagccctagtcatctactccctagttttttg
gacacttataatcggcagcagtatgaacaacagcaacagcaagcacttcaacagcaacaa
gcacaacagcagcatcagcaagtcgtgggtgttccacaaccaacgactcttgagccccga
tatccttttaaaacggaattacccgaggcgaagccaatttgctcaacctttccaccgcct
cctccctcttgtagctctccttcctcaactccgactacatcctcctcagcattcacctct
cctccataccaaacaggcggcggctccaatttcctcctaaaaaaggaacccatttatacg
tgtacaactgcctttgttcccaacatagcccctaattccccttaccaaagcaactcctcc
accaactactaccattctccttcatctccttcctacttttcttcatcctcagccaataat
acagccagtggaagcagcaacaatcctccaaccaataactttgataggcccatagttgca
aggaaaacatccgctccaagagcgtccacatcaactagtcaagggagtggagatgccgta
tcaaagctctctattcgtgtacccttgggcccccctcccccatctttatcctctgagtgc
tctcccaataaagcatcactcctctgtgctgtttgtggggacaatgcggcatgtcagcac
tatggtgtccgtacatgtgagggctgtaaaggctttttcaaacgaaccgtccagaaaaat
gcaaaatacgtttgtttagctgataaaaactgtcctgttgataagagacgtcgaaatcga
tgtcagttttgccgtttccaaaaatgtcttgccgtgggtatggtaaaggaagttgtgaga
acggattctctcaagggacgccgaggacgacttccttccaagcccaagagtccaacagaa
tcccctccatcacctcctgtgagtctcatcaccgcacttgttcgagctcatattgatacc
tctcctgatatgaataatctggactattcccaatttgtggaaacttcaattgaggatgaa
agagactccaaggaaaatatgttggcaaacgaagccataaaaatcggacaattttatcat
gttttaacgagttccatagaagttattcgcaatttctgtgaaagaattcctggtatttcc
gaactgtccctcaacgatagggatctactctttcaaacctcttgtctagagttatttgtc
cttcgattagcttatagatctaatcctgattcggatcgatacactttttgtaatggagtg
gtactacatgtaagtcaatgtgaacaaacctttggggattggctcaatggtatcaatgaa
tttgctcggggtcttcattccatggaattggatatatccgcattttcttgcctttgtggt
ctcatactagtcaatggtaaggatgagcgtcacggattgtcggatcccaagaaggtagag
tccattgagaacaagatcattaactccctcaaggatcacgtcacatataatcccgaagct
caaaagaaagaacattatatgacacggatattggatcgacttccagctctaagatctctc
tcaatgcaagggcttcaacggattttcttcctcaaatgggaggatctcgttcctgctcca
cctctcatagaaaaaatgtttgcttccagcatacccttttga
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