Lepeophtheirus salmonis (salmon louse): 121118974
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Entry
121118974 CDS
T08214
Name
(RefSeq) rhophilin-2-B isoform X3
KO
K28056
rhophilin-2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121118974
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Others
Others
121118974
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
HR1
PDZ
PDZ_6
FAM199X
Motif
Other DBs
NCBI-GeneID:
121118974
NCBI-ProteinID:
XP_040569515
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All DBs
Position
5:26268501..26454903
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AA seq
710 aa
AA seq
DB search
MPASSITSNEDLILYQIEKTLRKGSDPRAATCRGKLQSKRSKLNMEINKELMLRSGAENL
FKATTNKKMKETVALELSFVNSNLQLLKEQLAELNSSVELYQNSDGRQEIPMIPLGLKET
KEIDFREPFKDFILEHYSEEAGVDYENAIAEFMDIRQAMRTPARDTNGIALLFEHLNQLY
FVERRFFPPDRSLGIFFEWYDSLTGVPSSQRTVAFEKASVLFNIGALYTQIGTRQNRGKT
SGLDAAVDNFLRSAGTFQYIHENFTNAPSMDLSPDTLEMLVHLMCAQARECLFEKSELSF
YDKEKDDIDVCLVLGQEASHVSEVFKKVSKIMSQPPVKDYVPYTWVSLSQVKKEYYSALA
HYYVAIGLLDHKDDKLSKKTWETLQFLHEEEDKDNKNKSPIIEVRVPTNNQEKRLLGKAH
LREALLLHEESFRMNRMCRELRKKDGLQEILRLTHDRSLNKYASIDDEDDFQEVLDPPSI
SPSTQYQLSLNFPDLSQHKVQDLFADLGPVAIFNAKHHWSAPRSIKLRKKDTEGFGFSVK
GDSPVVIAGVDINSLAEMGGMKESDYIVGINDQDVKWAPHDEVVTLIKSSGNVLKLKLVT
PMDKNYTKEKVFHSKHNSLHHHPGGSLMTRGSISPSSTSGHSTGSGGESSSPASSITSGS
TRSAGSGTTGSNKKAWNLFKRSNNNHNHNNTNLKKTFGSTTLLEDNIILR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccggcctcgtccattacgagtaacgaggatcttattctatatcagatagagaaaaca
ctacgcaaaggatcagatcctcgtgcggcaacatgtcgaggaaaactacaatccaaacga
tccaaactaaacatggagatcaacaaagaacttatgcttcgatccggtgccgagaattta
tttaaagcaacaactaacaaaaagatgaaagaaactgttgcattagagcttagctttgtt
aattctaatctccaactccttaaagagcaattagcagagcttaatagctccgtcgaacta
tatcaaaactctgatgggcgtcaagaaatccctatgattcctttgggtcttaaagagaca
aaagaaatagattttcgtgagccatttaaggatttcattctagagcactactctgaagag
gcaggagtggattatgaaaatgccattgcggaattcatggatattcgacaagccatgagg
actcctgcgagagatacaaatggaatagctcttctatttgaacatttaaaccaattatat
tttgttgaaagaagatttttcccaccggacagaagccttggcattttttttgaatggtat
gattccttaactggagttccgagtagtcagaggaccgttgcttttgagaaggcttcagtc
ctttttaatattggggctctctacactcaaattggtacacgtcaaaatcgtggcaagaca
tctggactggatgcagccgtggataactttctacgttctgctggtacttttcaatacatt
catgagaactttacaaatgctccaagcatggacttgagtcctgatactctagaaatgctt
gtgcatttaatgtgtgctcaagctcgagagtgtttgtttgaaaagtctgagctctcgttt
tatgacaaggaaaaggatgacattgacgtttgtcttgttcttggacaagaagccagtcat
gtatccgaggtcttcaaaaaagtctctaaaattatgtctcaaccccctgttaaagactat
gttccctatacgtgggtctccctatctcaagtcaaaaaagaatactacagtgctcttgct
cactactatgttgccattggactcttggaccataaagatgacaaattgtcaaaaaagact
tgggaaacccttcagtttcttcatgaggaagaagataaggataataagaataaatccccc
atcattgaagttagagttcctacgaataatcaggaaaaaagattactcggtaaagctcat
ttacgtgaagccttattactccatgaggaatcttttagaatgaatagaatgtgtcgagaa
cttcgtaaaaaagatggacttcaagaaatccttcgactcactcatgatcgttctcttaac
aaatacgcttctatcgatgacgaagatgactttcaagaagtccttgatccaccttctata
tcaccttccacgcagtatcaactctccctgaacttccccgacttgagtcaacacaaggtt
caggacttgtttgcagatcttgggcccgtggctattttcaatgcgaagcatcattggtca
gctccacgatccattaagttgcgtaaaaaggatacagaaggatttggattcagtgttaaa
ggagattctcctgttgttattgcgggggtggatattaatagtctggctgagatgggcggt
atgaaagaaagtgactatatcgttggaattaatgatcaagatgtcaaatgggccccccat
gatgaagtcgtcaccttaattaaatcatctggcaatgtactcaaattgaaactagttact
cccatggataagaattacaccaaagaaaaggtcttccattctaagcataactcacttcat
catcatcctggtggttccctcatgactcgaggatccatttctccttcctccacaagtggc
cattcaacaggatcagggggtgaatcttcctctcctgcaagttctattacatctggtagc
actcgctcagctggctctggtactactggatctaataaaaaggcatggaatctattcaaa
cgctccaataataatcacaatcataataatactaatctcaagaagacctttggatctaca
actcttcttgaagataacatcattcttcgatga
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