Lepeophtheirus salmonis (salmon louse): 121119484
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Entry
121119484 CDS
T08214
Name
(RefSeq) actin-5C
KO
K05692
actin beta/gamma 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
lsm04145
Phagosome
lsm04517
IgSF CAM signaling
lsm04518
Integrin signaling
lsm04814
Motor proteins
lsm04820
Cytoskeleton in muscle cells
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121119484
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121119484
04518 Integrin signaling
121119484
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121119484
09142 Cell motility
04814 Motor proteins
121119484
04820 Cytoskeleton in muscle cells
121119484
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121119484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121119484
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121119484
03036 Chromosome and associated proteins [BR:
lsm03036
]
121119484
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121119484
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121119484
04147 Exosome [BR:
lsm04147
]
121119484
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121119484
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
121119484
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121119484
NuA4 complex
121119484
Chromatin remodeling factors
BAF complex
121119484
PBAF complex
121119484
GBAF(ncBAF) complex
121119484
SWR1 complex
121119484
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
121119484
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121119484
Exosome [BR:
lsm04147
]
Exosomal proteins
Proteins found in most exosomes
121119484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121119484
NCBI-ProteinID:
XP_040570088
LinkDB
All DBs
Position
6:complement(944195..945993)
Genome browser
AA seq
376 aa
AA seq
DB search
MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPVEHGIITNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPLNPKANREKM
TQIMFETFNMPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLD
LAGRELTNYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASSSLEKS
YELPDGQVITIGNERFRAPEALFQPSFLGMESCGVHETTYNSIMKCDVDIRKDLYANTVM
SGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDECGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaagacgttgctgcattggtcgttgacaatggttccggcatgtgcaaagct
ggattcgctggtgatgatgctcctagagctgtattcccatccattgttggtcgtccccgt
caccaaggtgtcatggtcggtatgggacaaaaagactcctatgttggagatgaagctcaa
tccaagagaggtatcctcaccttgaagtaccccgttgagcacggaatcatcaccaactgg
gatgatatggaaaagatctggcatcataccttctacaatgagctccgtgttgccccagag
gaacaacccgtcctcctcactgaagctcctcttaaccccaaggcaaacagagagaagatg
actcaaatcatgtttgagaccttcaacatgcccgccatgtatgttgctatccaagctgtc
ctctctctttatgcctctggtcgtaccactggtatcgttatggactctggagatggtgtt
tcccacaccgttcccatctatgaaggttatgctctcccccatgccatcctccgtttggac
ttggctggccgtgaactcaccaactacttgatgaagatccttactgagagaggatactcc
ttcaccaccactgccgagcgtgaaatcgtccgtgacatcaaggaaaaactctgctatgtt
gcccttgacttcgagcaagaaatggccactgctgctgcttcctcctcccttgagaagtcc
tatgaacttcccgacggtcaagtcatcactattggcaacgaacgtttccgtgcccctgaa
gccctcttccaaccctctttcttgggaatggaatcctgtggtgttcacgaaactacctac
aactccatcatgaagtgtgatgttgacatccgtaaggatctctatgccaacaccgtcatg
tctggtggaaccaccatgtaccccggtattgctgatcgtatgcaaaaggaaatcactgct
cttgctccttccaccatcaagatcaagatcattgctccccctgagagaaagtactctgta
tggattggaggatccatcttggcttccctctccactttccaacagatgtggatctccaag
caagaatacgatgaatgcggcccatccattgtccacagaaagtgcttctaa
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