Lepeophtheirus salmonis (salmon louse): 121121338
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Entry
121121338 CDS
T08214
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm02010
ABC transporters
lsm04146
Peroxisome
lsm04977
Vitamin digestion and absorption
lsm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121121338
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121121338
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121121338
04980 Cobalamin transport and metabolism
121121338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121121338
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsm02000
]
121121338
Enzymes [BR:
lsm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
121121338
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121121338
Transporters [BR:
lsm02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
121121338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_29
AAA_21
AAA_28
AAA_16
Motif
Other DBs
NCBI-GeneID:
121121338
NCBI-ProteinID:
XP_040572164
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All DBs
Position
1:complement(26645493..26647473)
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AA seq
589 aa
AA seq
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MKNKLSSVLTGNYRINWKLFVRIGKLHAIISRNLINIFVTICLLGVCILEQYVGYKTGLV
AGAFYEVLLNKDTEGFKATAIHSFGVILGIAVVKTVRMYVAKILSVFWRRTLTTNLHNLY
FDADSYYKVNVLIKELGLDNPDQRMTSDVDTFCLVYGEMIARLIISPFTIGFYTWDAYTR
SGWIGPIGVFIYFILGCFVNLFLMSPVSQRVFFMEKNEGDFRFKHMFLREKAEEIAFSNS
AIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSL
DQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILEKHNSNPTFF
KDNAICTNDKDPHMFETMINLENIILKIPSPTTPRVLIDNLNLSIKTGDRILITGASSSG
KTSLLRLIRGLWPTVEGSISFFTDSIEFLSQRPLMTDGSLLQNMIYPSEVPISPDLIWFK
DQLTRFNLEHLYKQYDLFQYQNRWEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPT
NIEAMLYEYLIITCPKITILSVGHRDSLRKYHMKELQLQCNGEWELKQI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagttatcatctgttcttactgggaattaccggataaattggaaattattt
gttcgaataggaaaacttcatgccatcatttcgaggaatcttattaacatttttgtgaca
atttgcctcttgggtgtctgtatactggaacaatatgttggatataaaacaggtcttgtg
gctggtgctttctatgaggttctcttaaacaaggatacggaaggattcaaggctactgca
attcatagttttggagttattcttggaattgcagtggttaaaaccgttcgaatgtacgtt
gccaaaatactgagtgttttttggagaagaacattgaccacaaatctacataacttgtat
tttgatgctgatagttattacaaagtcaacgttctcatcaaagagttgggattggataat
ccggatcagagaatgacatccgatgttgatacattttgccttgtttacggagaaatgata
gctcgtctcatcatatcaccatttacaattggtttctatacttgggatgcatataccagg
tcaggttggatagggcccatcggtgtatttatttattttatcttgggatgttttgttaat
ttattcttaatgtctccagtttcgcagagagtcttttttatggagaaaaatgaaggagac
tttcgatttaagcatatgtttttgcgagaaaaagcggaggaaattgctttttctaattct
gctataattgaatccattaaaactaataagttactgaaaagtctaatcaagtctcaactc
agtgtttatacttgggaaatccttttggatttatggatcaatattttcgattatgttgga
gctataatcagttatttaataatagcagttcctgttttcacgggattctatgattctctg
gatcaagcaaaacttgggaatcaaatatcacaaaattcatttgtctgcatgactcttatt
tacaatttgtcccaacttgtggatttagcaagtaaatttgcgaatatggcaggtgttact
caccgtatgattgaactcgtggaaatattagaaaaacataatagcaatccgacttttttt
aaagataatgcaatatgcactaatgacaaggaccctcatatgtttgaaacaatgatcaat
cttgaaaatatcattttgaaaattccaagccctacaactcctcgcgtcttgattgataat
ctgaatttaagtattaaaacaggagatagaattttaattacgggggccagttcaagtggt
aaaacaagtctacttcgcttgattcgtggattatggccgacagtagaaggatctatctct
tttttcacagatagtattgaatttttgtctcaaagacccttaatgactgatggatctctt
ctgcagaatatgatttatccatcagaagttccaataagtccagacttaatatggttcaag
gatcagttgacaaggttcaatttagagcatttatacaaacaatacgatctatttcaatat
caaaatcgatgggaagatattttatcacctggcgaaatgcaaagaatttgttttattaga
gtgttttatcatcggcctcaggtagtgttattagacgagtccacagcctcactcccaaca
aacattgaagcgatgctatatgagtatcttataataacatgtcctaaaataactatcctt
agtgttgggcatagagactctttaagaaagtatcatatgaaggagcttcaacttcaatgt
aatggagagtgggaattgaaacagatttaa
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