Lepeophtheirus salmonis (salmon louse): 121127524
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Entry
121127524 CDS
T08214
Name
(RefSeq) actin, clone 205
KO
K05692
actin beta/gamma 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
lsm04145
Phagosome
lsm04517
IgSF CAM signaling
lsm04518
Integrin signaling
lsm04814
Motor proteins
lsm04820
Cytoskeleton in muscle cells
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121127524
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121127524
04518 Integrin signaling
121127524
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121127524
09142 Cell motility
04814 Motor proteins
121127524
04820 Cytoskeleton in muscle cells
121127524
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121127524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121127524
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121127524
03036 Chromosome and associated proteins [BR:
lsm03036
]
121127524
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121127524
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121127524
04147 Exosome [BR:
lsm04147
]
121127524
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121127524
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
121127524
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121127524
NuA4 complex
121127524
Chromatin remodeling factors
BAF complex
121127524
PBAF complex
121127524
GBAF(ncBAF) complex
121127524
SWR1 complex
121127524
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
121127524
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121127524
Exosome [BR:
lsm04147
]
Exosomal proteins
Proteins found in most exosomes
121127524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121127524
NCBI-ProteinID:
XP_040578856
UniProt:
A0A0K2UPC6
LinkDB
All DBs
Position
13:complement(11094472..11096125)
Genome browser
AA seq
376 aa
AA seq
DB search
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS
YELPDGQVITIGNERFRCPEALFQPSFLGMESCGVHETVYNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPGIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgacgaagttgcggcacttgttgtagacaatggatccggtatgtgcaaagca
ggattcgctggagatgacgctcccagagctgtattcccctccattgtcggtcgcccaaga
catcaaggtgtcatggtgggtatgggacaaaaggactcttatgttggagatgaagctcaa
tccaagagaggtatcctcaccttgaagtaccccattgaacatggaatcatcaccaactgg
gatgatatggaaaagatctggcatcatacattctacaacgaactccgtgttgcacccgag
gagcaccccattcttcttacagaagcccctcttaaccccaaggccaacagagaaaagatg
actcaaatcatgtttgaaacattcaactcccctgccatgtatgtcgcaattcaagctgtc
ctttccctctatgcctctggtcgtaccactggtattgtcctcgactctggagatggtgtc
tcccacaccgttcccatctatgaaggttacgctcttcctcatgccatccttcgtttggat
ttggctggtagagatttgaccgactacttaatgaaaatcctcactgagagaggttattcc
ttcaccaccactgctgaacgtgaaatcgtccgtgacatcaaggaaaagctctgctatgtt
gctcttgactttgaacaagaaatggccactgccgccgcttccacttctctcgaaaagtcc
tatgagttgcctgatggacaagtaattaccattggtaacgagagattcagatgtcctgaa
gcccttttccaaccctcattcttgggaatggagtcctgcggcgttcacgagactgtctac
aactcaatcatgaagtgtgatgtcgacatcagaaaggacttgtacgcaaataccgttctc
tctggaggcaccaccatgtacccaggtattgctgatcgtatgcaaaaggaaatcacggct
cttgctccttctaccatcaaaatcaagatcattgccccacctgagagaaaatactctgtc
tggatcggtggctcaatccttgcttccctctccaccttccaacaaatgtggatctccaaa
caagaatacgacgaatctggccctggaatcgttcacagaaagtgcttctaa
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