Fructilactobacillus sanfranciscensis: LSA_05400
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Entry
LSA_05400 CDS
T01627
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lsn
Fructilactobacillus sanfranciscensis
Pathway
lsn03030
DNA replication
lsn03430
Mismatch repair
lsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSA_05400
03430 Mismatch repair
LSA_05400
03440 Homologous recombination
LSA_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsn03032
]
LSA_05400
03400 DNA repair and recombination proteins [BR:
lsn03400
]
LSA_05400
Enzymes [BR:
lsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSA_05400
DNA replication proteins [BR:
lsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSA_05400
DNA repair and recombination proteins [BR:
lsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSA_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DUF4209
Motif
Other DBs
NCBI-ProteinID:
AEN98979
UniProt:
G2KVG4
LinkDB
All DBs
Position
complement(528720..529259)
Genome browser
AA seq
179 aa
AA seq
DB search
MEMNFVAIDFETAASQRASACSVALTVVRDDQVVNEFYSLINPETDFNWRNIQVHGIHSE
DVADAPTFPEIWEIIKPFFKRNRLVIAHNNRFDNSVLRKSIERYRLPMPHYQTLDTVKTT
RKFYPNFENHKLNTVSVNLGIDLEHHHNALDDSLACANILIHEHQQFGDDAIRPFVTTI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atagagatgaactttgtcgcaattgactttgaaactgccgctagccagcgtgcaagcgcc
tgctcggtagctctgaccgttgttcgtgatgatcaagttgtaaatgaattctattcgtta
attaatccagaaactgattttaattggcgtaacattcaagttcatgggattcatagtgaa
gacgttgctgatgcaccaacttttcctgaaatttgggaaattatcaaaccatttttcaaa
cggaatcgactcgtgatcgctcataataaccgttttgacaatagcgtcttaagaaaaagt
attgaacgttatcgtttaccgatgcctcactatcaaaccttagatactgtcaaaaccact
cgcaaattttatcccaactttgaaaatcacaaattaaataccgttagtgttaatttaggg
attgatttggaacaccatcacaatgctttggatgatagtttagcttgtgccaacatcctc
attcatgaacaccaacaatttggtgatgatgccattcgcccctttgtcacaacaatctaa
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