Fructilactobacillus sanfranciscensis: LSA_06120
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Entry
LSA_06120 CDS
T01627
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsn
Fructilactobacillus sanfranciscensis
Pathway
lsn03030
DNA replication
lsn03410
Base excision repair
lsn03420
Nucleotide excision repair
lsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSA_06120 (polA)
03410 Base excision repair
LSA_06120 (polA)
03420 Nucleotide excision repair
LSA_06120 (polA)
03440 Homologous recombination
LSA_06120 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsn03032
]
LSA_06120 (polA)
03400 DNA repair and recombination proteins [BR:
lsn03400
]
LSA_06120 (polA)
Enzymes [BR:
lsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSA_06120 (polA)
DNA replication proteins [BR:
lsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LSA_06120 (polA)
DNA repair and recombination proteins [BR:
lsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LSA_06120 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSA_06120 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEN99035
UniProt:
G2KW59
LinkDB
All DBs
Position
599386..602085
Genome browser
AA seq
899 aa
AA seq
DB search
MTEKKLLLIDGNSLTYKAFFALYTSMDRFTSPDGLHTSAVYGFNRMLNDILADIKPTTVL
AAFDAGKKTFRTKMYSDYKAGRAKMPDELREQFPYVMDLLKARGIKTYELKDYEADDIIG
TTAKIAEKEGYHVDIITGDRDLTQLCSEKTTVKVSKKGVSDLEDYTPTYVKKNMGINPEQ
IIDIKGLQGDTSDNYPGVEKVGPKTAIKLIKQYGTVQGLYDHIDEITAKKLKEHLVNDEK
QAFLSKKLATIDTNAPIDIKLADLIYKGPQEPELSDFYKKMGFKSFLNSSNNADNQLGTS
KIELPEVEFTELSKENLDEVNSLGNEITFNLETINPNYHTAEQLGFVIGNGKKWFVSRDM
SLLSDKRIKQILENSEINKNIFDTKAQIVGLHRNEIGFQGVDFDMLLVSYLINTLNNEDD
IGEVANRHGYFGVLSDEEVYGKGKSFQIPDNHELFEHMVRKALAISTLKKQMLEKLKEHQ
QADLYRDLELPLARVLSAMEIQGISVNQDKLEELKSKFTERVSEYKQKIYQEAGEEFNIG
SPKQLGIVLFEKMGLPVIKKTKTGYSTAVDVLEQLAPDHPIIENILNYRQLTKLISTYLD
GIKADITDDGKVHTRYLQTLTQTGRLSSVDPNLQNIPVRTEEGRKVRETFVPSHKGWKLF
SSDYSQIELRVLAAISGDKNMREAFESGEDIHAATARRIFELDKDAVITPTLRRQAKAVN
FGIVYGISSFGLAHNTGISNGDAKRFIDKYFNEYPGVKQYMEDSVKFAKEHGYVETISHR
RRYIPEIQSKRFQQRQFAERIAMNSPIQGSAADIIKAAMIKMQSVLKEKGLQAKMLLQIH
DELIFEAPETEIPVLEKLVPQVMDSIMKTDKLLSNSTVDFNVPLKVESHPGSDWYNIKK
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaaaaacttttattaattgatgggaattcattaacttataaggcatttttt
gctttatatacctcaatggatagattcactagtccagacggattacatacaagtgcggtt
tatggatttaatcggatgttaaatgatatcttagctgatatcaaaccaacaactgtttta
gcagcatttgatgctggtaaaaagacctttcgaacaaaaatgtattctgattataaagca
ggccgagcaaaaatgcctgacgagttgagggaacaatttccttatgtgatggatttgcta
aaagctcgaggaatcaaaacttatgaattaaaagattatgaagctgatgatattatcggt
acaacggctaagatagctgaaaaagagggttatcacgttgatattattactggagaccgc
gatttaactcaactttgttctgagaaaacaaccgttaaagtttccaaaaaaggggtcagt
gatcttgaagattatacaccgacctatgtaaaaaagaatatgggtataaatcctgaacaa
attattgatattaagggacttcaaggtgatacttctgataattatccaggtgtagaaaaa
gttggtccgaaaacagcaattaaattaattaaacagtatggtacggttcagggtctttat
gaccatattgatgaaattacggctaaaaaattaaaagaacatttggtaaacgatgagaag
caagcatttctttcaaagaaattagctacaattgatactaacgcaccaattgatattaaa
cttgctgatttaatttacaagggtccacaagaaccagaattatctgatttttataaaaaa
atgggatttaaatcatttttgaatagttcaaataatgccgataatcaacttggaacctct
aaaattgaactaccagaagttgaatttactgagttaagtaaagaaaatctcgatgaagtt
aatagtttaggtaatgaaataacttttaatcttgaaacaattaatcctaactaccatacg
gctgaacaattaggtttcgtaattggcaatggaaaaaagtggtttgttagtcgcgatatg
agcttattatctgataaacgaattaaacaaattttagaaaatagtgaaattaataaaaat
atttttgataccaaagcacaaattgttggattacatcgtaatgagattggatttcaaggc
gttgattttgacatgcttttggtctcatatttaattaatacactcaataatgaagatgat
atcggagaagttgctaatcgccatggttatttcggtgttttatctgatgaagaggtttat
ggcaagggaaagagctttcaaattccagataatcatgaattattcgagcatatggtgcga
aaagcattagctatttcaacattaaaaaaacaaatgcttgaaaaactaaaagaacatcag
caagctgatttatatcgtgatttggaacttccattagctcgcgttttgagtgcaatggag
attcaaggaattagtgttaatcaagataaattagaagaattaaaaagtaaatttactgaa
cgagttagtgaatacaaacaaaaaatctatcaagaggccggtgaagagtttaatattggc
tcacccaaacaattaggaattgtgttattcgaaaaaatggggcttccagttattaaaaaa
actaagactggttactcaaccgcagttgatgttttagaacaattagccccagatcatcca
attattgaaaatattcttaattatcgtcaattaactaaattaatttctacgtatttggac
ggaattaaagctgatattacggatgatggtaaggtgcacacacgatacttgcaaacctta
acgcaaactggtcgattatcatccgttgaccctaatttacaaaacattcccgttcgaact
gaagaaggccgtaaggttcgtgaaacttttgttcctagtcataaagggtggaaattgttt
tcttctgattattctcaaattgaattacgtgttttagctgcgatttctggcgataaaaat
atgcgagaggctttcgaaagtggagaagatattcatgcagccaccgctcgtagaatattt
gaattggataaagatgctgtaatcacaccaactttaagacgacaagccaaagcggttaac
tttggaattgtgtatggaattagttcgtttggattagcgcataataccgggatttcaaat
ggtgacgctaaacggttcattgacaaatattttaatgaataccctggtgttaagcaatat
atggaagattcagttaaatttgccaaagaacatggatatgttgaaactatttcccatcgc
cgacgctacattccagaaattcagtccaaacgttttcagcaacgtcaatttgccgaacga
attgcgatgaattctcccatccaaggaagtgcagctgacataattaaggcggcaatgatt
aaaatgcaatctgttttaaaagaaaaaggattacaagctaagatgcttttacaaattcat
gatgagctaatttttgaagcaccagaaacagaaatcccagttttagaaaagttagtacca
caagtgatggactcaattatgaagacagacaaattactcagtaattcaactgttgatttt
aatgttccattaaaggttgaaagccatcctggatcagattggtataatataaaaaaataa
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integrated database retrieval system
