Fructilactobacillus sanfranciscensis: LSA_09560
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Entry
LSA_09560 CDS
T01627
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsn
Fructilactobacillus sanfranciscensis
Pathway
lsn03410
Base excision repair
lsn03430
Mismatch repair
lsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSA_09560
03430 Mismatch repair
LSA_09560
03440 Homologous recombination
LSA_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsn03400
]
LSA_09560
DNA repair and recombination proteins [BR:
lsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LSA_09560
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LSA_09560
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LSA_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEN99356
UniProt:
G2KWG2
LinkDB
All DBs
Position
complement(931226..933544)
Genome browser
AA seq
772 aa
AA seq
DB search
MLSSKYDWQIKANHAKPKQIEDLASQLGISQLIAQLLINRGYDNSDKIRHFLSPDTSDLY
DPFLLHDMDKAVERIQMAVSEGEKITIYGDYDADGLTSTSIMYETLQEIGANVNYYIPNR
FDDGYGPNIDAYRKIISDGTTLIVTVDNGVSGFDAIEEANKLGCDVVITDHHELPKKLPN
AYAIVHADLSPDYPFKHLSGAGIAFKVATALNDEIPQEKIDLAAIGTVADLVSMTGENRA
IVQFGLNVIHLTERPGLKSLIKHAKLKLPKISEEDIGFKIAPSLNALGRMGDASSGVELL
TTNDEVQADKLAKITEKKNEQRKELVAQIAVEAEQQAETPENLKRKILIIAGKAWQTGVL
GIVASRISDKYHKPTVVLGIDETTGVAKGSGRSIAGFDLFKALDRSRDQMVAFGGHEMAV
GLTISLDKIKEVSNNIEQVATEEKLDINHKPILIIDYEVNADDINDHLYEDLSVLSPFGV
DNPKPEFAIKPNNLSSISAIGADKFHLKFEILGYHSKIGAIDFGVGSELREIQKLSNNLK
VAGTLGKNEFRGRTNLQIMVDDLKVDGCVVIDQRTNKLVQQMFKQPGEYVFFNEKLKNKL
TGYLNDESTAILANQIDSKNPHKKIIIVDCPKNIDDFKTLINKIDAHEIVLYLYKPQQLR
SFGMPKREQYAKLFKFVNVHQNVKLNQHLKEMCKDLKIDQTSLVFMIKVFDELGFVTIQD
GIMNKVDNPNKHPLSSASTYKQREQEIELENQLISLNQNALINLIQEMQNKQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgttatcttctaaatatgattggcaaattaaagctaatcacgcgaaaccaaagcaaatt
gaagacctagcttctcaacttggcatcagccaattaatcgcccaattattgattaatcgt
ggatatgataattcagataaaattcgtcattttttgagtccagatacttctgatttatat
gatccttttttgcttcatgatatggataaagctgttgaaagaattcaaatggcagtatca
gaaggcgaaaaaattacaatttatggtgattatgatgcagatgggttaactagtacatca
attatgtatgaaactttacaggaaattggtgcgaacgttaattactatatccctaaccgt
tttgatgacggatatgggccgaatattgatgcctatcgaaagattatttctgacggaaca
actttaattgtgactgttgataatggagtatctggatttgatgcaattgaagaagcaaat
aaacttgggtgtgatgtagtgattactgatcatcatgaattgccaaaaaaattgcctaat
gcatatgcaattgtgcatgcagatttaagtcctgattatccatttaagcatttatcaggt
gcagggattgcatttaaagttgcaacggcgcttaatgatgaaattccacaagaaaaaatt
gatttagcggcaattggaacagttgctgatttggtatcaatgacaggtgaaaaccgtgct
atagttcaatttggactaaatgtaattcatttgactgaaagaccggggttaaaatcatta
attaagcacgcaaaattaaaattacctaaaattagtgaagaagatattggattcaaaatc
gctccttctttgaatgctttaggtcgaatgggggatgcatcttctggtgttgaactttta
actaccaatgacgaagttcaagcagataagttagctaaaataactgaaaagaaaaatgaa
caacgaaaagaattagtggctcaaatagcggttgaagcggaacaacaagctgagaccccg
gaaaacttaaagcgtaagatcttaataattgctggaaaagcttggcaaactggtgtctta
ggaattgttgctagtcggatttctgacaaatatcataaaccaactgttgtattaggaata
gatgaaactactggagttgctaaaggttcaggacgaagtattgctggatttgatttattt
aaagccttagatcgaagccgtgaccaaatggttgcttttggtggtcatgaaatggcagtg
ggattaacgatatcattagataagattaaagaggtgtctaataatatagaacaagtagca
actgaagaaaaattagatattaatcacaagccaattttaatcattgattatgaagttaat
gcggatgatattaacgatcatctttatgaagatttgtccgttttaagtccctttggagtt
gataatccaaaaccagaatttgcaattaaacctaataatctcagtagtatttcagcaatt
ggtgctgataaatttcatttaaaatttgaaattctaggttatcatagtaaaattggagca
attgattttggagttggttctgagttaagagaaatccaaaaattatctaataatttaaag
gttgctggaactttaggtaaaaatgaatttcgcggtcgaactaatttacaaattatggtt
gacgacttaaaagtagacggttgtgttgtgattgatcaacgtaccaataagttagtacaa
caaatgtttaagcaacctggtgaatatgttttctttaacgaaaaattgaaaaataaatta
accggttatttaaatgatgagtctacagcaatattagcaaatcagattgactcgaaaaat
ccacataaaaaaataatcattgttgattgtcctaagaatatagatgattttaaaacgtta
attaataaaattgatgcacatgaaatagtattatatctatataaacctcaacaacttaga
tcatttggtatgccaaaacgagaacaatatgctaaactatttaagttcgttaatgttcat
caaaatgtaaaattaaaccagcatttaaaagaaatgtgtaaagatttaaaaattgatcag
acttctttagtatttatgattaaagtttttgatgaattaggttttgtaaccattcaagat
ggaataatgaataaggttgataatcctaataagcatccattaagtagcgcgtctacatat
aaacaacgagaacaagaaattgaacttgagaatcaactgattagtttaaaccaaaacgca
ttaattaatttaattcaagaaatgcaaaataagcagtga
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integrated database retrieval system
