Fructilactobacillus sanfranciscensis: LSA_09580
Help
Entry
LSA_09580 CDS
T01627
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lsn
Fructilactobacillus sanfranciscensis
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsn03016
]
LSA_09580 (rnz)
Enzymes [BR:
lsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LSA_09580 (rnz)
Transfer RNA biogenesis [BR:
lsn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LSA_09580 (rnz)
Prokaryotic type
LSA_09580 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AEN99358
UniProt:
G2KWG4
LinkDB
All DBs
Position
complement(933918..934856)
Genome browser
AA seq
312 aa
AA seq
DB search
MQLEFFGTGAGVPGKFRNVSSVALRLLDEINEVWLFDCGEGTQQQILRSTLKPRKINKIF
ITHLHGDHIFGLPGLLSSRSFQGGDEQLTIYGPKGIKEFVQVSLRVSQTKLGYKINYVDL
DEPGIIYEGPKFTVIAAKLEHQVESWGYRVVEHSHPGELMVDKLKADDIPAGPIYGKLKK
GETVQLSNGRVIDGKEYIGPAQKGRIVTILGDTRKTPNIQKLSQNANVVVHESTFGKGEA
KLARNYYHSTNVQAAIMAKSSGVERLLLTHISARYTAKMARELQKQAREIFPNTKVVKDF
DFIDIPFEKKED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcagttagagttttttggaacaggggcaggagttcccggtaagtttagaaatgtttca
agtgttgcgttacgcttacttgatgaaattaatgaggtatggttgtttgattgtggggaa
ggaacccagcaacagattttgcgttcgactttaaaaccacgaaaaatcaataaaattttt
atcacccatcttcatggtgatcatatttttggattaccaggcttactttcaagtcggtca
tttcaaggcggagacgaacagcttacaatatatggtccaaaaggaattaaagaatttgtt
caagtatcacttagagtttcacaaactaaattgggttacaaaattaattatgttgatctt
gatgaaccaggaataatttatgagggaccaaaatttacagtgattgctgcaaaattagaa
catcaagttgaatcttggggatatcgtgtcgttgaacatagtcatccaggtgaattaatg
gttgataaattaaaggcggatgatattccagctggtccaatttatggtaaattaaaaaaa
ggcgagacagttcaactttcaaatgggcgcgtgattgatggaaaagagtacattggaccg
gcacaaaagggtcgaattgtaactattttaggtgatacacgtaagacaccaaacattcaa
aagctttcacaaaatgcaaacgtagttgttcatgaaagtacttttggtaaaggagaggct
aagctagctcgtaattattatcattctaccaacgtacaagccgccattatggcgaaatca
agtggagttgagcggttgttgttaacacatatatcagcacgttatacggctaaaatggca
cgtgaattgcaaaagcaagcacgtgaaattttccccaatactaaagttgttaaagatttt
gattttattgatattccatttgaaaagaaagaagattaa
DBGET
integrated database retrieval system
