Fructilactobacillus sanfranciscensis: LSA_11070
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Entry
LSA_11070 CDS
T01627
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lsn
Fructilactobacillus sanfranciscensis
Pathway
lsn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LSA_11070 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsn03021
]
LSA_11070 (rpoA)
03400 DNA repair and recombination proteins [BR:
lsn03400
]
LSA_11070 (rpoA)
Enzymes [BR:
lsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LSA_11070 (rpoA)
Transcription machinery [BR:
lsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LSA_11070 (rpoA)
DNA repair and recombination proteins [BR:
lsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LSA_11070 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Ig_GpJ_C
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AEN99495
UniProt:
G2KVW6
LinkDB
All DBs
Position
complement(1077045..1077995)
Genome browser
AA seq
316 aa
AA seq
DB search
MIEFEKPNIHKIEETNNYGEVVVEPLERGYGTTLGNSLRRILLASLPGAAVTSVQIDGVL
HEFSTVKGVTEDVTKIILNLKKLKLKIDSEDNDTHTLSINVTGPADVTAADITTDSETTI
LNPDLHIATVAEGATLHMTMTANKGRGFVSAEENKARNDDMPIGVLPIDSIYTPIERVNY
QVEDTRVGQRDDFDKLTLDVWTNGSISPSDAISLAAKILSQHLDMFVDLTDRAQKANVMV
EKEETHKEKMLEMSIEELDLSVRSYNCLKRAGINTVQELTDKSMADMMEVRNLGRKSLEE
IENKIDALGLSFRKED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaagcctaacattcataaaattgaagaaacaaataactacggtgaa
gtagttgtcgaaccattagaacgaggatatggtactacacttggtaattcattgagacgt
attttacttgcctcattacctggtgctgctgtaactagtgttcaaatcgatggtgtttta
catgaattttctactgtaaagggtgttactgaagatgttactaaaatcatcttgaacttg
aaaaagcttaagttgaaaattgactctgaagacaatgacactcatacattgagtattaat
gtaactggtcctgctgatgtaactgctgctgatattactacagatagtgaaactacaatt
cttaatccagacttgcatattgctactgttgctgaaggtgcaactttgcatatgacaatg
actgctaacaagggtcgcggtttcgtatcagctgaagaaaacaaagctagaaacgatgat
atgccaattggtgtattaccaatcgattctatttataccccaatcgaacgtgttaactac
caagttgaagacacacgtgtaggacaacgtgatgactttgataagttgacattagacgtt
tggacaaatggttcaatttctccttcagatgcaatttcattagctgctaagattttaagt
caacatttagacatgtttgttgatttaactgatcgtgcacaaaaagctaatgttatggta
gaaaaagaagaaacccataaagaaaaaatgcttgaaatgtcaattgaagaactagatctt
tcagttcgttcatacaactgtttgaaacgtgctggaattaacactgttcaagaattaaca
gacaagtcaatggcagacatgatggaggttagaaatcttggccgtaaatcacttgaagaa
atcgaaaacaaaattgatgctttaggtttgtcatttcgtaaagaagattag
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