Lucilia sericata (common green bottle fly): 119612455
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Entry
119612455 CDS
T08270
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119612455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsq03400
]
119612455
Enzymes [BR:
lsq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119612455
DNA repair and recombination proteins [BR:
lsq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119612455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
SPN1_m3Gcap_bd
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
119612455
NCBI-ProteinID:
XP_037824188
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MEIADTIKFRDICSMLNKIKEYENKDKKAKIVKQYYDSFCKHREKFREQQQWKPEMEEDG
RSSFYCVLRCLIPNADMARPPYGLQIPSLGKVFIKILQLGSESRDAEILEARNFNGFRGD
YAERVYRVLKPRCSHQPSNLTLKQVHDMLDTIANENRLNTEKVLIQLSETASAEEQMWFV
RLLLKSMHLGIGDQRIFGILHPQAKAFFQICANLSKLCCNIADNKFNLATTAPSTTSALG
ALDLPVNIQPFEYIRPQLCEVFPGNIENLMANDVLYMETKMDGERFQLHYQNNRFKYFSR
KGIDYTHSFGSCYDEDNKLTSKLQHLLPIGMTSVILDGEMMVWNTYHNKYHEKGENTDVK
NLNNARNCQPCFVVYDLLFWNGESMLKMPYIQRMHKLKHLFKEQEGVLQLMKSVKVTSPE
DFKQKFQQALDQHEEGVVLKQQRAAYAPGRRNGSGWYKVKADYIEGLTTEFDLLVIGAFF
NRTRTFVESFLVGVLKYVSLQQFEVYSIGKVSNNTTQRVVLNNTLKPHWHLATEEPPPLW
YHYRETNAEGRPDAWIEPRNSVILQIKATDLNPSGAFALSMALHFPRIQAWRNDKLWHEC
LSLEEYNQLKQSSGRGAIKKIVKRTVSLEDFTGERVKRRKMTAAEKRNLGLQAYNKKFDP
SNVEKVSNLLNDFSVCILSASLNRGYTPEYLKTLVVQNGGTVVDNPLPNNPACIVVAGDK
TYRVQMLCKAQQYDIVSMDWFLRICEKQKFKLRPRDMLSMTDNLRERFSEFCDKWGDHYT
EFVSSKELKRICDHMQDKDVPDLDDEELLELENLIYKQLNRNWFRNKYAYFYTIDAESEK
AKLSYQWHGGNVLNDRNLNSESYSKINYVFINLLQFDKTKFLDWLKERFSDNLSHLQIIN
ITWILESHKARMMLDVKEYTWHDF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagcagatacaattaaatttcgtgatatatgttctatgttaaataaaattaaa
gaatatgagaataaggataaaaaagcaaaaattgttaaacaatattatgattcattttgt
aaacatcgagaaaaatttagggaacagcagcaatggaaacccgaaatggaagaggatggt
cgcagcagtttctattgtgtattaagatgtctgataccaaatgccgatatggcacgtcct
ccttatggcctacaaataccctctttgggtaaggtgtttattaagattttacagttgggt
tcggaatcaagagatgctgaaattctagaagctcgcaattttaatggatttcgtggtgac
tatgccgagagggtctatagggtcctaaagccacgttgcagccaccaacccagtaattta
acgctaaaacaagtgcatgacatgttggatactatagcaaatgaaaatcgactaaatacc
gaaaaagttcttatacaactctctgaaactgcctcggctgaagaacaaatgtggtttgtg
cgacttctattaaaatctatgcatttgggtattggagatcaacgtatttttggcatatta
catccacaggccaaggccttttttcaaatatgcgccaatctctctaaactatgttgcaat
attgctgataataaattcaatctagccaccaccgcaccctcaactacatctgcactagga
gctttagatttacccgtcaacatacaaccttttgaatacatcaggccccagctgtgtgaa
gtatttcctggtaatatagaaaatctaatggccaatgatgttttatatatggaaactaaa
atggatggtgaaagattccagttacattatcaaaataatcgttttaaatatttctcccgc
aaaggcattgattacacgcacagctttggttcctgttatgatgaggacaataaattgacc
tcgaaacttcagcatcttttacccataggtatgacttccgtaattttagatggtgaaatg
atggtgtggaatacctatcataataagtaccatgaaaagggtgaaaatactgatgttaaa
aatttgaataatgcccgcaattgtcaaccttgttttgtggtctatgatctgttgttttgg
aatggtgaatcaatgctgaaaatgccctacatacaaagaatgcataaattgaagcatttg
tttaaggagcaggagggtgttttgcagctaatgaaaagtgtaaaggtaacttcgccggaa
gattttaagcaaaaatttcaacaggctctggatcaacatgaagagggtgtagtgttgaaa
caacagagggcggcttacgcaccaggacgtaggaatggtagtggatggtataaggttaaa
gcagattatatagaaggtttaacgactgaattcgatctgttggtaatcggtgcatttttc
aatcgtactcgcacatttgtagaatcctttctggtgggtgttcttaagtacgtttccctt
caacaattcgaagtgtattccattggcaaagttagcaacaataccacacaacgtgttgtc
ctaaataacactttaaaaccacattggcatttagctacggaggagccaccaccattgtgg
tatcattacagagaaacaaatgccgaaggtcgaccggatgcctggatagaacccagaaat
tctgttattctacaaattaaagccaccgatttaaatccttcaggagcttttgctttatca
atggctttacattttccacgtatacaagcctggcgtaatgataaattgtggcatgaatgt
ttgtctttggaggaatacaaccaattgaaacaaagttctggtagaggtgccatcaaaaag
atcgttaagagaactgtaagtttagaagattttacgggagaacgtgtaaaacgcaggaaa
atgacagcggctgagaaacgtaatctgggtttgcaggcatataataagaagtttgatccc
tccaatgtggaaaaagtttcaaatttattgaatgactttagtgtttgtatactaagtgca
tccctaaataggggctatactcccgagtatttgaaaactttggtggtacaaaatggtggc
acagtagtggacaatcctttacccaataatcccgcttgcatagtggtagccggtgataaa
acctatcgcgtgcaaatgctttgcaaagcccaacaatatgacatagtatctatggattgg
tttttacgtatttgtgagaaacagaaattcaaattaagaccacgtgatatgttgtccatg
actgacaatctaagagaacgtttcagcgagttctgtgataaatggggtgatcattatacg
gagtttgtttcatccaaagaacttaaacgtatatgtgatcatatgcaagataaagatgta
cctgatctggatgatgaagaattgttggaattggaaaacttaatatacaaacaacttaac
cgtaattggttccgtaataaatatgcctacttctatacaatcgatgcggaatcggaaaag
gcaaaattaagttatcaatggcatggaggaaatgttttgaatgatagaaatttaaattcg
gagtcttacagcaaaataaattatgttttcattaatctcctgcaatttgataaaacaaaa
tttttggattggcttaaggagagattttccgataatttatcacatttgcaaataattaat
ataacatggattttggaatcgcataaagctagaatgatgctggatgtaaaggaatatact
tggcatgatttttaa
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