Lonchura striata (white-rumped munia): 110467869
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Entry
110467869 CDS
T05897
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110467869 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110467869 (TRPC5)
Protein phosphatases and associated proteins [BR:
lsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110467869 (TRPC5)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110467869 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
110467869
NCBI-ProteinID:
XP_021380929
UniProt:
A0A218UUS5
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Position
4A:17686024..17790170
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AA seq
989 aa
AA seq
DB search
MAQLYYKKVNFSPYRDRIPLQIVRAEAELSSEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGDDSDSEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKEETNEDGAGEKPRAKSVSFNVANKKKDFNVSALIKTMSGMNMVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPSSEPMYTISDGIIQPHYMWKDIKYSP
MDREREENCSKSEINLNEVAYSGNTRLTGQSKECPVVCTSSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtcaacttctccccgtaccgagaccggatcccactc
cagatcgtgcgagcggaggcagagctctcgtcggaagagaaagcctacctcagtgctgtg
gagaagggggactatgccagcgtgaaacatgccttgcaggaggcagagatctactacaac
atcaacattaactgcatggatcctctgggtcgcagtgccctcctcatagccatagagaat
gagaacctggagatcatggagctgctgctgagccacagcgtctacgtgggggatgctctg
ctctacgccatacggaaggaggtggtgggagctgtggagctgctgctcaattacaggaag
cccagtggtgaaaaacaggttccaacgctgatgatggacacccagttttcagagttcact
ccggatatcacccccatcatgctggcggctcacaccaacaactacgagatcatcaaactg
cttgtccaaagacgggtgacgatcccacgcccacaccagatcaggtgcaactgtgtggaa
tgtgtctccagctccgaggtggacagcctgaggcattccaggtcgaggctgaacatctac
aaagccttagccagcccttcgttgattgccttatcgagcgaggatcccatcctgactgcc
ttccgcctgggctgggagctgaaggagctgagcaaggtggaaaatgagttcaaggctgag
tatgaggagctttcccagcagtgcaagcgttttgctaaggaccttttggatcaagcacgg
agttcccgggagctggagatcattctcaatcatagggatgatcagagcgaagagctggat
ccccagaaatgtcacgatttggcaaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccgaactgccagcagctactagcaacgctttggtacgacggctttcca
ggatggaggaggaaacactgggcagtgaaactcctgacctgtgtcaccattggactgctg
ttccccgtgctatccgtggcgtacctgattgcacccaagagcaggctgggactgttcatt
aaaaagccatttatcaagtttatctgccacactggctcctacctgaccttcctgttcatg
ctcctgctggcatcgcagcacatcgtcaggaccgacctccacatgcaggggccacctccc
accatcgtggagtggatgatcctgccctgggttctgggtttcatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtacgtacatgactggtggaatctgatggatttt
gcaatgaactccctctatcttgcaaccatctcccttaaaattgttgcctatgtcaagtac
aacggctcccgcccgagggaggagtgggagatgtggcacccgaccctgattgcagaagct
ctctttgcaatatccaacatcctgagttccctgcggctcatctccctgtttacagccaac
tcacacctgggacccctgcagatttctctgggacgcatgctgctagacatcctcaaattc
ctttttatctactgcctggtgcttctggcttttgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtcactcttctggtctgtgttt
gggctgctgaatctctacgtcaccaacgtgaaagccagacacgagttcacggaatttgtt
ggggccacgatgtttgggacctacaacgtcatctccctggtcgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccacgcggacatcgagtggaag
tttgcgcggacgaagctctggatgagttacttcgacgaaggcgccactctgccccctcct
tttaacattgtccccagtcccaagtcggtctggtacctttgcaagtggatccacaaccag
ctgtgcccaggagatgactctgacagtgaacagaagaggcacgaaaacctcaaaacattc
acagaacgtcacgctgacaacctgattcagaatcaacattaccaggaagtgataagaaat
cttgtgaaaagatacgttgctgcaatgataagaacttccaaaaccaacgaaggtttaact
gaagaaaatttcaaggaattaaaacaggacatctcgagttttcgctatgaagttcttgac
ctcttaggcaacaggaagccccagaggagaagttactctaccagcagcacagaggtgtcc
caaaaggaggaaacaaatgaggatggtgctggagaaaagcccagagccaagagcgtgtct
ttcaatgtagccaacaagaaaaaggacttcaacgtgtctgctctgattaaaaccatgtct
gggatgaacatggtggaggagaagccaaaaagcaacgggatcagcaagcgctcctttgtg
cgaaacgggaacagagtgcagagactctccagctccaagaaggaatccttcaagaggctg
ggcctgctcttctccaagatgaacggccacgtccccgagcccagctcagagcccatgtac
accatttcagacggcatcattcagccccactacatgtggaaagacattaaatattctccc
atggacagagagagagaagagaattgttccaaaagtgaaattaacctcaatgaggtggcc
tacagtgggaacacgagacttacaggacagagcaaggagtgccctgtggtttgcaccagt
tcccttcactgtgcttccagtatttgttcctctaactccaaacttatagactcgtcagag
gatgtgtttgattcatggggagaggcctgtgacttgtttataaaccagtggaaagacggg
caggaggatcatgttaccactcggctctga
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