Lonchura striata (white-rumped munia): 110467886
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Entry
110467886 CDS
T05897
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04010
MAPK signaling pathway
lsr04020
Calcium signaling pathway
lsr04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110467886
04020 Calcium signaling pathway
110467886
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110467886
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110467886
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110467886
Protein kinases [BR:
lsr01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
110467886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
I-set
Ig_3
Pkinase
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR-2_TMD
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Ig_4
Ig_5
C2-set_2
C2-set_3
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
110467886
NCBI-ProteinID:
XP_021380965
LinkDB
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Position
4A:16509050..16604760
Genome browser
AA seq
1280 aa
AA seq
DB search
MLKPELEDQIVISLFFFLKIKCWGAPSVSWQLREDNPRVHVSSCRDVPGLSCSQLVLRRA
TANDTGYLSCALSSTPEHQGLVARIYVFVQDDRNPFVEMHPEHPDIIYITDDKRIVVIPC
RVTSPDIRPKLTQYPSSAEINFRKMVWDPKRGFVIPSHSFVPSGILTCSAQVNGSVFNSY
YMAQRLEGRIQNLALKASAKKLLVGETLKLECKAETFINGRIEFIWTCPRGTHPHPRRTM
DQSDVVYKVGSSLIIENVTMEDGGLYICRTFNATRLEANVTVTVYEKPYITVSHKKGPYY
EITSGHKSLKLAAKVDAFPRPTVTWYKDGKLIKDNHTCYEPDPLKYRLGIRDVRPKHAGN
YTMVLSNPKYGLYKNLTMQLVVTERPKIYEKETDFDKVVKVELRSKQEIQCTASGNPEPR
IEWKWQPCSLTDTLCNPEGPKVVVWENTVIGNKIRSIENAPMRQGDKPKIVSTLTMEDSS
ASGIYYCVASNKVGEEERSIAFYVSDVPSGLQTSSQVTAIVGNDVQLTCRASKYIYTHLA
WYYPSSEPAPSHSVVRKMDRYSISLTLLIPNVTREQSGLYKCRAQNQQNSTDTLEQQSQL
LVREKAAPFVIQNLTDLEVNISGKILLECKVSGTPEPQVTWRKNGYPISAASGISMENNT
LVIERVKKDDEGLYECQASNDLGQDSTSAFIKIQGSEEKSNIEVIILVCTGLAATLFWLL
LTLFIRKLRKPDATDIKTGYLSIIMDPEEMPLDEQCDRLPYDSSKWEFPRDRLRLGKTLG
HGAFGKVVEASAFGIDKSSTCKTVAVKMLKECATTNECKALMSELKILIHIGHHLNVVNL
LGACTKAGGPLMVIVEYCKYGNLSNYLRGKRGDFIAYKSQENSDQAEKSLDESNSDLTEL
IKRRLESVASTGSSASSGFIEDKSYSDSEDDEEDAEDLYKRPLTLEDLICYSFQVAKGME
FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAI
FDKIYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEDFCRRLKEGTRMRSPEYSTPEIYQ
TMLDCWHGVPTERPTFTELVERLGDLLQANVQQDGKDYIPLNISLCPDGESNSKTCPVEE
NLNNGVNRWSAVETGNNSKKRPLSVKTFDEVPVEKEKVMHEESDSGMVLTSDEIKSPKRL
EIRSWPYGIMALARRAVSRSKESILADHETVKYQPAVQVEEDTMDFPLEDSVLLPMDPNL
ECHSPPPDYNSVMHYSAPPV
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcctgaactggaggaccaaattgtcatctcactttttttttttctaaaaata
aaatgctggggagccccgtctgtgagctggcagctgagggaggacaacccgcgggtgcac
gtgagcagctgccgcgatgtccccgggctgagctgcagccagctcgtcctcaggagagcc
acggccaacgacactggctacctcagctgtgccctcagcagcacccccgagcaccagggg
ctcgtggccaggatctatgtctttgtccaagacgacaggaatccatttgtggagatgcac
ccggaacaccccgacatcatctacatcacggatgataaaagaatagtggtgatcccctgc
cgggtcacctccccagacatcagacccaagctcacccagtacccttcttctgcagagatc
aacttcaggaagatggtgtgggaccccaagagaggctttgtcatcccctcccactccttc
gtgccctctgggatcctcacgtgctcggcccaagtcaacggcagcgtcttcaactcctac
tacatggcccagaggctggagggtagaatacagaacctggctctgaaggcaagtgccaaa
aagctgctggttggagaaactctcaagctggagtgcaaagcagagaccttcatcaacggg
cgcatcgagttcatctggacgtgtccccgaggcacacaccctcaccccaggagaacaatg
gaccagagtgatgtcgtgtacaaagtcggcagcagcctgataattgaaaatgtcaccatg
gaagatgggggcctgtacatctgcaggacattcaatgccaccaggctggaagccaatgtc
actgtcaccgtgtatgaaaagccctacatcacggtctcacacaagaaagggccttactac
gagattacctcaggacacaagtccctgaaactggctgccaaggtggacgcctttcctcgg
cccactgtcacctggtacaaggatggcaaactgatcaaggacaaccacacctgctatgag
ccagatccactgaaatacagactgggaatacgagatgtgagaccaaaacatgctgggaac
tacaccatggtcctgagcaaccccaaatacggcctctacaaaaacctcaccatgcagctg
gtggtgacagagagacccaagatctatgaaaaggaaacagattttgataaggttgtgaag
gtggaattgagaagcaaacaggaaattcagtgcacagcaagcgggaatcctgagcccagg
atcgagtggaagtggcagccctgcagcctcacagacaccctatgcaatcccgaggggcca
aaagttgtggtttgggagaacacagtcataggaaacaagatcagaagcatcgagaacgcc
cccatgaggcagggggataaaccaaagatcgtgagcaccctcaccatggaggacagcagt
gcctcgggaatctattactgcgtggcttccaacaaggtgggcgaggaggagcggagcatc
gccttctacgtgtcagatgtgccctctgggttgcaaacatcctcccaagtcacagccatc
gtggggaatgacgtccagctgacctgccgggcctccaagtacatttacacccacctggcc
tggtactacccctcctcagagccagctcccagccactctgtggtcaggaaaatggacaga
tattccatctctttgaccctgctcattcccaacgtcacgagggagcagagtggcctctac
aagtgcagagcccagaaccagcagaacagcacggacacgctggagcagcagagccagctc
ctggtcagagagaaggcggcgccgtttgtgatccagaacctcacggacctggaggtcaac
atcagtggtaagatcctgctggagtgcaaggtcagtgggactccagagccacaggtcacc
tggaggaagaatggctaccccatctcagcagcatcaggaatttccatggaaaacaacacc
ctggtgattgagagagtgaagaaggacgatgaggggctctacgagtgccaagcctccaat
gacctgggccaggacagcacatcagccttcatcaaaatccaaggttctgaggagaaatcc
aacattgaggtgatcattctggtgtgcacagggctggctgccacgctcttctggctcctc
ctgaccctcttcattcgcaaactgagaaagcccgatgccacagatattaaaacaggatac
ctgtcaattatcatggacccagaggagatgccccttgatgagcagtgtgaccgcctgccc
tacgacagcagtaaatgggagttccccagggacaggctgcgcctgggtaaaactctgggt
catggtgcttttgggaaggtggtggaggcgtctgcttttggcattgataaatcttcaacc
tgcaaaacagttgccgtaaaaatgctgaaagaatgtgcaactactaatgaatgcaaggct
ttaatgtctgagctgaagatactcatccatataggacatcacctgaacgtggtcaacctg
ctgggagcctgcaccaaagctggaggtcctttaatggtcatagtggaatattgcaaatat
ggaaatttgtccaactatctccgagggaaacgaggagatttcattgcatacaagtcccag
gaaaactctgaccaagcagagaagagtctggatgagtccaacagtgatttgactgaactg
atcaagaggcgcctcgagagtgtggccagcacaggcagctctgccagctcaggatttatt
gaagataagagttacagtgactcagaagatgatgaagaagatgctgaggatctgtacaag
aggcccttgactctggaggatctgatttgctacagcttccaggtggcaaaaggcatggag
ttcctcgcctcccgaaaatgcatccaccgggatttggcagctaggaacatcctcctgtcc
gagaacaacgtggtcaagatctgtgacttcggccttgccagggatatttacaaagacccc
gactacgtacggaagggagatgcacggcttccactcaagtggatggctccagaagctatt
tttgacaaaatttacaccacgcagagtgacgtgtggtctttcggagtgctgctgtgggaa
atattttctctaggtgcctctccataccctggggtgcagatagatgaggatttctgccgg
cggctcaaggaagggacccggatgagatctccagagtattccactcccgaaatctaccag
acaatgctggactgctggcatggggtccccacggagagaccaacgtttaccgagctggtg
gagcgcctgggggatctccttcaggccaacgtgcagcaggatggcaaagactacattcca
ttgaacatcagcttgtgtcctgatggagaatccaactccaaaacctgcccagtggaagaa
aacttgaacaatggagtgaatcgctggagtgcagtagaaactggtaacaacagcaagaag
agacccctgagtgtgaagacatttgatgaggtgccagtggaaaaggagaaagtgatgcat
gaggagtctgacagtgggatggtgctgacctcagatgagatcaaaagccccaagaggttg
gaaatccgttcctggccctatgggatcatggctctggcgcggagagctgtcagcaggagc
aaggaatccatcctggctgaccacgagactgtcaagtaccagccagcagtgcaggtggaa
gaggacaccatggacttccccctggaagactctgtcctgctccccatggatcccaacctg
gaatgccacagccctcctccagattacaactctgtcatgcactactcggcccccccagtg
taa
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