Lonchura striata (white-rumped munia): 110468869
Help
Entry
110468869 CDS
T05897
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00900
Terpenoid backbone biosynthesis
lsr01100
Metabolic pathways
Module
lsr_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110468869 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lsr01006
]
110468869 (GGPS1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110468869 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110468869 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
110468869 (GGPS1)
Prenyltransferases [BR:
lsr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110468869 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
110468869
NCBI-ProteinID:
XP_021382773
UniProt:
A0A218VB76
LinkDB
All DBs
Position
3:44097027..44119998
Genome browser
AA seq
299 aa
AA seq
DB search
MDGMDETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASL
LVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLE
LHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNTLG
LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENI
DIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVQQLSKMFKEPEN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatggatgaaacatctaaaagaatcctagagccataccagtatctgcttcaa
ctaccaggtaagcaagtgagaaccaaactgtcacaggcctttaatcactggctgaatgtt
ccagaagataaaatacaggttatcattgacgtgacagagatgttgcacaatgcaagtcta
cttgtggatgatattgaagataactcaaagctacgacggggctttccagtggcgcacagt
atctatggaattccgtctgtaatcaactgtgctaattatgtttattttcttggcttagag
aaagttttaacccttgatcatccagatgctgttaaagtttttacccgtcaacttctggaa
ctccataaaggtcaaggcttggatatttactggagggatacttacacctgtcctacagag
gctgagtataaagcgatggtactgcaaaagacaggcggtctcttcggattagctgtaggc
ctcatgcagctgttctcgaattataaaaaagacttaaagccacttcttaacacacttggt
ctcttcttccaaataagagatgactatgccaacttgcactccaaagaatatagtgagaac
aagagtttctgtgaagacttaactgagggcaagttctcattcccaaccattcatgcaatt
tggtcaagacctgaaagtactcaggtgcaaaacattttacgtcaaaggacagagaacata
gatataaaaaaatactgtgtacattaccttgaaaatgttggttcctttgagtacactcgg
aatacattgaaagagcttgaatctgaagcctataaacaaattgaatcacttgggggaaac
cctgagcttgtagcactagttcaacagctgagcaaaatgttcaaagaacctgaaaattaa
DBGET
integrated database retrieval system
