Lonchura striata domestica (Bengalese finch): 110469205
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Entry
110469205 CDS
T05897
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110469205 (PKP1)
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
110469205 (PKP1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Mo25
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
110469205
NCBI-ProteinID:
XP_021383411
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All DBs
Position
26:4213113..4257897
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AA seq
733 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYTKTQTGNSNWGYPLYNGTLKRDVESRRYSSYS
QMEGWASRAHSKALCSPRAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKAHGGGRAEHKA
TLNRQSIYSSCSTQQGTSRTSKKVPARALSCPSSNKPDVVYAQPMMSCKQDGVYGQAQSS
SKICGDEIDAGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAKL
VELLRSQNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLTG
LLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLRN
LSSADMGRQTMRNYPGLIDSVMTYTQNCVASSRPDDKSVENCICILHNLSYRLDAEVPNK
YTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTYL
SLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSNSSEVVR
SGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTSSYGEIMTSACYTLRNLIMSNP
HLGKSYLSSNLLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMGS
LAGTTFRTLSSRF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactccccgctgaaaaccgcgctggcctacgagtgcttccaggaccaggccagc
tccacgctggccctgccctcggaccacaagctgaaaaccaagggcacgggcaagcagcgc
gtccaggagcaggtgatgatgactgtcaagaggcagaagcaaaagtcgtcggtgtcgtca
agcgtgggccactcaaaccgaggttccatgtacgatggtttagctgatggttatggctat
gggacatcccggggcagctactacaccaaaacccagacagggaacagcaactggggatac
ccgctctacaacgggacgctgaagcgggacgtggagagccggcgctacagctcctacagc
cagatggagggctgggccagccgggcccacagcaaggccctgtgcagcccccgcgccggc
agcgactactgcttcgtgcagaacatcaagagcagccgcagcgagcccgacctctactgc
gagccgccccgcggcaccctgcgcaaggcccacggcggcggccgggccgagcacaaggcc
accctcaaccgccagagcatctacagcagctgcagcacccagcagggaaccagcaggacc
agtaaaaaggtgccggcgcgggccctgtcctgcccctcgagcaacaagcccgacgtggtc
tatgcccagcccatgatgagctgcaagcaggacggggtctatggccaggcccagtccagc
tccaagatctgtggtgacgagattgatgctggcaccatgaccatccagaaggccatccag
ctcctgtgctcctccgatgacaagtaccaggccatgggggcttactacctgcagcacacc
tgcttccaggatgagtctgccaagcaagaggtctatcggctggggggcattgccaagctt
gtggagctgctccgcagccagaaccagaatgtgcagcgggcggcagccggagccctccgg
aacctggtgttcaagaaccccaccaacaagatcgaaacccggcggcagaacgggatcagg
gagtgcgtgagcctcctccgcaggacaggcaacactgaaattcagaaacagctcacagga
ctgctctggaacctctcctccactgatgaactaaaagaagagttgatacaggaggctctg
cctgtgctgacagactgtgttatcatccctttctcgggctggtctgatggcagctgcaac
aggacacgagaaattatcgacccagaagtgttcttcaatgctacagggtgtttgaggaac
ctgagctctgcagacatggggcgccagaccatgaggaattaccccggcctgatcgactct
gtcatgacttacacccagaactgcgtggcctccagccgccccgatgacaagtctgtggag
aactgcatctgcatcctgcacaacctctcctaccgcctggatgctgaagttcccaacaaa
tacacccagctcaaccacatggcccggagcgtttacatggacaaaactctcacaggctgc
ttcaacagcaggagtgggaaaatggagaatgatgagtatggggttccccttcccgaggag
gatttcaaacccaaaggccctagctggctctaccactcagatgccatccgcacctacctg
tccctgatggatcagagcaagaaggatgccaccctggaagcttgtgctggagctctgcag
aacctcactgcgagccgagggctgatgtccaatgccatgagccagttgattgggctgaag
gagaaggggctgccccgcatcgctcgcctgctccagtccaacagctctgaggttgtccgc
tccggggcctctctgctgagcaacatgtccaggcatcctgtgctccacaaaaccatggct
caccaggtgctcccagatgtgtcccgtctcctgtcgttccagtctggaaacaccagcagc
tatggggagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaacccc
cacttgggaaagtcttacctgtccagcaacttgttaaataatgtagtgagcctgtgccgg
aatggctcctgtccaaaagcagctgaagctgctcgacttctcctgacagacctttggtct
aacagggagctccagagtgtgctcaagcagcaagggtttgacaagaacatgatgggatct
ttagctggaacaaccttcaggaccctctcctcaagattttag
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