Lonchura striata (white-rumped munia): 110469934
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Entry
110469934 CDS
T05897
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110469934 (RNF123)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110469934 (RNF123)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110469934 (RNF123)
Multi subunit type E3
KPC complex
110469934 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
DUF7050
Motif
Other DBs
NCBI-GeneID:
110469934
NCBI-ProteinID:
XP_021384854
UniProt:
A0A218UQG7
LinkDB
All DBs
Position
12:3657483..3704676
Genome browser
AA seq
1308 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHRVFTSADGNQPAAAYRKNLT
FQNLQEHLERLLSEENGSEDSRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLAVLCPPEYMVCFLHRLISALRYFWDGHKAKTPASLSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANILIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
ALAIGGALARPAWLSSPTLGRANRFLSTAAVSLMNPRRPLGTLEKIKVLTLRAEQRTRED
IEGTHGNEGLLLGRPPEEPDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEDLPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADLL
RSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPG
LESVDHYPILVAVTGILVRLLVDTDVQGTERATAVLLADPCFQLRSIQYLLGHAEPSALA
AAAPATDKRHFSLHTYTEYISTEELAKVEKMLNHLSEESKQAAATTLPTSEEDLCPICYA
HPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagaggtgctgggactgctttctcaaggaagaattacaggctgagcactgag
ccagagaagtccaaggtcacagggattgtgaacagcaggctgctgaatgattatctgcat
cgagtctttaccagtgctgatgggaaccagcctgcagctgcttacaggaagaacctgacg
ttccagaacctgcaggagcaccttgagcgattgctgtcagaggagaatggctctgaagac
agcagagatcaggtggcagagggtcggctcggtccctccactgtggtgttggaccacact
agcggctttgaggggctcctgctggtcgatgatgacttactgggggtaattggccacagt
aactttgggtccatcagggccacaacatgtgtctataaagggaaatggatttatgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggcgttggggacacgccagattcgtatgcctatgatggaaacagggtgcgc
aagtggaacgtgactactacaaactatggcaaatcctgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaatggcatatctctggga
actgcctttgataacatcacgaggggtgctggaatggcttatttccctgccatcagcctc
tccttcaaagagtctgttgcttttaactttggaagccgtccactccgttatccagtggaa
ggttaccggcccttgcaagatcctcctgtggcagacctggtgaaggctcggaagctgttg
ggctacttgaagaatgtgatccatattggaatagatgtgacggaggggaagctggtggag
aaagacacatccatgtggcagctgcaaggagaacccacagtgttgattacattagctcac
atcttcaattatttctcccctcttatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgttgagcatccttgagcgaggaggggcagtggaggcccacccccttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctcaag
cagctactgatgtccctgctgcgggcttacaggttctcccccatcatcccagacctggga
ttacaaatccactacctccggctcaccattgcagtcttgaagcatgagaaatctaggaaa
tacctactcagcaatgttctcttcgatgtgctccgttcagttgtgttcttctacatcaag
agccctctgcgtgtggaggaggcaggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaagaggtgaaggaggagagtgctgaggag
agattgaggcgtcgggcatatgaaagaggctgccagcggctcaagaaacgcattgaagtg
gtggaaggtctccaggttcagattctgaagttgctgctgaacaacaaggacagaggaggg
ggggaagcctccagatacatcttcctaaacaagttccgcaagtttcttcaggaaaacgct
agcaacagagggaacttggctgtgttgtgcccaccagagtacatggtgtgcttcctgcac
cggctcatctctgccctgcgctacttctgggatggccacaaagcgaagaccccagcttcc
ctgagcagtgaagaggcctatgtccctcctcaactcttctataatggaaaggtggattat
tttgaccttcaacgacttggaggtcttttgtctcatcttaagaagactctgaaagatgac
ctggctgcaaaagccaacatcctgatcgaccctgcggagctgcaggcagtgactatggat
gatcttgatgaagatgaggaatcagcaacatcagcagcacagtcccagcgtccgtctgct
gccctggccattggtggagctcttgccaggcctgcctggctcagctcccccaccctgggc
cgggccaacaggttcctgagcacggcagccgtcagcctgatgaacccacggcggcccctt
ggaaccctggagaagatcaaagtgctcacgctgcgtgcggagcagcgcacacgggaggac
attgaaggcacccatggaaacgagggtctcttactgggcagacccccagaagagccagac
cagcccatcactgagaactccctcctggaagtcctggatgggatagtgatgatgtacaac
ctcagtgtccaccagcagcttggaaagatggttggtgtgtcagatgatgtgaatgaatat
gccatggcactgaaagacacggaggaaaaaatcagccgctgcccaaagaggaggagagac
atccatgaggaactgctgaagagccaaaaggtcttctctgagaagctcaaccacctgagc
cggcgcctcgcttggataaatgtcaccatttattcaaaggagaagatgcaggatatctac
tggctgctgcgagtgtgcatccgcaccatcgagcacggcgacaggacgggctcgcttttc
gctttcatgccagaattctacctcagcgtggctatgaacagctacagtgcactcaagaac
tacttcagccctgtcaacagcatggaggaccttccaggctatgaagagacccttatgcgc
cttgctgccatcctggccaagcattttgctgactcgaggattgtgggcacagacatccgg
gactccctgatgcaggcgttggccagctacgtctgctacccccactcgctgcgtgctgta
gagaggatcccagaagagcagcggatctccatgatgaagaacctcctggctccctatgag
cagcgaccctgggcacagaccaactggattcttgtcaggctgtggcggggctgtggcttt
gggtacagatatacacggctcccacacctgctgaaaaccaagcctgaggatgccagcctc
cccagcctgcagaagccgtgtccctccaccttgctgcagcggcacatggcagacctgctc
cgcagcgaccgcgacctggcccccagcttcctcaacagcgtcctcaaccagctgaactgg
gccttctccgagttcattggcatgattcaggagatccagcaggcagcagagcgcctggag
aggaactttgtggacagccggcagctgaaggtgtgtgccacttgctttgacctgtcagtg
agcctgctcagggtgctggaaatgaccgtcacgctggcaccagagattttcctcgactgg
aatcgcccgtcgtcagagctgctgctccggaggcttgcccagctcttgaaccaggtgctg
aaccgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgccggga
ctggagagcgtggaccattacccaatccttgtggctgtgacagggatactggtccggctg
ctggtggacactgatgttcaggggaccgagcgtgcgaccgcggtgctgctggcagatccc
tgcttccagctgcgctccatccagtacctgctgggccacgccgagccctcggccctggca
gcagccgccccggccacggacaagcgccacttctccctgcacacctacacagagtacatc
agtactgaggagctggcaaaggtggaaaagatgctgaaccatctgagtgaggagtccaag
caggcagctgcaaccacactgcccaccagcgaggaagacctatgccccatctgctacgca
caccccatctcagccatcttcaggccctgctcccataagtcatgcaaagcctgcatcaac
cagcacctgatgaacaacaaggactgcttcttctgtaaggccaccatcacaggggtggac
gacttcaccaagccagccagctcatag
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