Lonchura striata (white-rumped munia): 110473471
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Entry
110473471 CDS
T05897
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110473471 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110473471 (AP4B1)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Others
AP-4 complex
110473471 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
AP4E_app_platf
AP5B1_middle
Motif
Other DBs
NCBI-GeneID:
110473471
NCBI-ProteinID:
XP_021391702
LinkDB
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Position
26:complement(1328968..1335478)
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AA seq
756 aa
AA seq
DB search
MPYLGGEEALRELRRALSNPHVQADPARYRGAVLRVIRLMAQGADVSGLFPEMVKAGAVA
DVLQKKLVSFYVRAQAPRQPQLALLAVNSLRKDCAHPSPAVRGLALRTMCGLRMPGIQEY
LQQPLVNGLRDKASYVRRVAVLGCAKMVKLQGDCEVDGALVNELYSLLRDQDPIVVVNCL
RALEEILKKEGGVVINKPIAHHLLNRMPDLDQWGQSEVLTFLLRYKPRSEDELFDILNLL
DGYLKSSSPSVVMAATKLFLVLAREYPDVQADVLVRVKGPLLSACTSESRELCFTALCHV
RQILRSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDVS
EELAQGAIFAIANIARTYTEQCVGILTELLGLQQEHITSAVVRTFRDLAWLCPQCTDAVC
QALPGCEDTIQDSEGKQALIWLLGTHGEKIPNAPYVLEDFVENVKSESFPAVKMELLTAL
LRLFLARPAECQDMLGRLLYYCIEEEQDMAVRDRGLFYYRLLQSGVEEVRRVLCSPKSDP
SMGLLGDQSKQPVNAWASEFNTLATVYGRERWALATAQQPLEPSYFCPPCADSSSRDTES
LVSEGNKEVPEVHPDTLMSEGNKELLKAHPDAGSLSLIPDVSLTAEQFEKTWLSLDTSCQ
LSLPWCGPVHADTIQTALRVVHIQTIAMSKAGAQPWKAYLSAQDDSGCLFLTELLLEAAD
SELQVSVKQTEAKPEALQSFISALRTVLEAVAGLES
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctgggcggcgaggaggcgctgcgggagctccggcgggcgctgtcgaacccg
cacgtgcaggcggacccggcgcggtaccgcggcgccgtgctgcgcgtgatccggctgatg
gcgcagggcgccgacgtgtcggggctgttcccggagatggtgaaggcgggcgcggtggcg
gacgtgctgcagaagaagctggtgtcgttctacgtgcgcgcccaggcgccgcggcagccg
cagctggcgctgctcgccgtcaactcgctgcgcaaggactgcgcgcaccccagcccggcc
gtgcgggggctcgccctgcgcaccatgtgcggactcaggatgcccgggatccaggagtac
ctgcagcagccgctggtgaacgggctgcgggacaaggcatcctacgtgcgcagggtggcc
gtgctgggctgtgccaagatggtgaagctgcagggggactgcgaagtggatggtgctctg
gtgaacgagctgtacagtttgcttcgtgaccaggaccccattgtggtcgtgaactgtctg
agggccttggaagagattttgaagaaggagggaggtgttgtcatcaacaaacccattgcc
catcatcttctcaacaggatgcctgacctggaccagtgggggcagagcgaggtgctcacc
ttcctgctgcgctacaagccccgcagcgaggacgagctcttcgacatcctcaacctgctc
gacggctacctcaagagcagcagccccagcgtggtgatggcagccaccaagctgttcctg
gtgctggccagggagtacccagatgtgcaggcagatgtgctggtgcgggtgaagggcccg
ctgctgtctgcctgcacctcggagagcagggagctctgcttcaccgcgctctgccacgtg
cgccagatcctcaggagtctgcccggccacttcagcagccactacaaaaagttcttctgc
tcctactcggagccccactacatcaaatgccagaagatggaggtgctgtgtgagctggtg
aatgatgagaacgtgcagcaggtgctggaggagctgaagggttactgcactgacgtgtcg
gaggagctggcgcagggagcgatctttgccatagccaatattgccaggacatacacagag
cagtgtgtggggattctgacagagcttctggggcttcagcaggagcacatcacctcagct
gtggtccgtactttccgggacctggcctggctgtgtccccagtgcacagatgccgtgtgc
caggccctgcctggctgtgaggacaccatccaggacagtgagggcaaacaagcactgatc
tggctcctgggcacccatggggagaagatccccaatgctccctacgtcttggaggacttt
gtggagaacgtgaagtcggagtcgttcccagcagtgaagatggagctgctgacggcgctg
ctgcgcctgttcctggcccggcccgccgagtgccaggacatgctgggcaggctgctctac
tactgcattgaggaggagcaggacatggccgtgcgagaccgtgggctgttctactaccgc
cttctgcagtctggggtggaggaagtgaggagggtcctgtgcagccccaagtctgacccc
tccatggggctcctgggggaccagagcaagcagcctgtcaatgcctgggcttcggagttc
aacactctggccacagtttatggcagagagcgctgggccctggccactgctcagcagcct
ctggaaccctcttacttctgccctccctgtgctgactccagcagcagagacacagaatca
ctggtttctgaagggaataaggaagtccctgaggttcatcctgatactctgatgtctgaa
gggaataaagaactcctcaaggctcatcctgatgcaggcagcctaagcttgattcctgat
gtttccctgactgcagaacagtttgagaagacctggctgagcctggacacgagctgccag
ctctctctgccctggtgtgggcctgtccatgcagacaccatccagacagcccttcgtgtt
gtgcacatccagaccattgccatgagcaaagctggagcccagccctggaaagcttatctg
agtgcccaggatgactcaggctgcctcttcctcacagagctcctgcttgaggcagcagat
tcggagctgcaggtttcagtgaagcaaactgaagcaaagccagaggcactgcaatccttc
atctcagccttgaggacagtcctggaggcagtggctggactggagtcttga
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