Lonchura striata (white-rumped munia): 110474971
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Entry
110474971 CDS
T05897
Symbol
SMPD1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00600
Sphingolipid metabolism
lsr01100
Metabolic pathways
lsr04142
Lysosome
lsr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110474971 (SMPD1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110474971 (SMPD1)
09143 Cell growth and death
04217 Necroptosis
110474971 (SMPD1)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
110474971 (SMPD1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
110474971
NCBI-ProteinID:
XP_021394458
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Position
1:complement(159952..163977)
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AA seq
612 aa
AA seq
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MAAGARAPLAPLAPLAPLPPLPPLPPLPLVLAALVLLALPVAAGLPPGPEEQLVVAAAPR
WGWQNVSCPACRVLFGALDLALQLEPNVARVGRVASRLCQELRLARPPVCRQAVQLFQGD
VVAAWARSVLRPPEACGLLLGPRCGHWDILGAWNLSLPAAPKPPVRPPAPPPPGAPTARI
LFLTDLHWDRQYVPGSAAACPDPLCCRGAPREGPGAAGFWGSYSKCDLPLHTIDSLLAQL
PNGTGNGTGGFAAAYWTGDIPAHDVWQQSRGDQLRALRTVTALLRARLGGLRVFPAVGNH
EATPVNAFPPPYVRGNRSAAWLYDAMAEAWQPWLPPAALHTLRAGGFYTAQVWPGLRLVS
LNMNFCSQANFWLLINATDPAGQLQWLMGVLADAERDGEKVHIIGHIPPAHCLHSWSWNY
YRIISRFEGTIAAQFFGHTHLDEFELFYDEETLTRPVSIAFVAPSVTTYINLNPGYRVYE
VAGSYPGSSHAVLDHETFILNLTEANAAPPGTAPRWRRLYGAREAYGLPAAFPADWDQLV
RRMQDDEPLFQLFWFHLHKGHPPREPCGGPCKAALLCALRSGRAADPALCRPLRPALPFP
RIQELWQQRRLC
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggctcgggccccgctggccccgctggcaccgctggcaccgctgccgccg
ctgccgccgctgccgccgctgccgctggtcctggccgcgctggtgctgctggcgctgccg
gtggcggcggggttgccgcccggccccgaggagcagttggtggtggcggcggcgccgcgc
tggggctggcagaacgtgtcgtgcccggcctgccgggtgctgttcggggcactggacctg
gcgctgcagctggagccgaacgtggcccgcgtggggcgcgtggcgtcgcggctgtgccag
gagctgcggctggcgcggccgcccgtgtgccgccaggccgtgcagctcttccaaggagac
gtggtggccgcctgggcgcgctccgtgctgcgcccgcccgaggcctgcgggctgctgctg
ggcccccgctgcggccactgggacatcctgggcgcctggaacctgtccctgcccgctgcc
cccaagccgccggtgcggccgcccgcgccgccgccgcccggagcgcccacggcccgcatc
ctcttcctcacggacctgcactgggaccgtcagtacgtgccgggcagcgccgcggcctgc
cccgacccgctgtgctgccgcggggcgccccgcgaggggccgggggcggcgggcttctgg
ggctcctacagcaagtgtgaccttcccctgcacaccatcgactcgctgctggcccagctc
cccaacggcaccgggaacggcaccggcggcttcgcggcagcgtactggaccggggacatc
cccgcgcacgacgtgtggcagcagagccgcggggaccagctgcgggcgctgcgcaccgtg
acggccctgctgcgcgcccgcctcggcgggctgcgcgtcttccccgccgtgggcaaccac
gaggccacaccggtgaacgccttcccgccgccctacgtgcggggcaaccgctcggccgcg
tggctgtacgacgccatggccgaggcctggcagccctggctgccccccgccgccctgcac
accctgcgggctggagggttctacacggcacaggtctggcctggtctgcgcctcgtctcc
ctcaacatgaacttctgctcccaggccaacttctggcttctcatcaacgccactgaccct
gcagggcagctccagtggctcatgggggtcctggcagatgctgagcgtgatggggagaag
gtgcacatcatcgggcacatccccccagcccactgtctgcacagctggagctggaactac
taccgcatcatcagcaggttcgagggcaccatcgcggcgcagtttttcgggcacacgcat
ctggacgagttcgagttgttctacgatgaggagacgctgacacgtcctgtctccatcgcc
ttcgtcgcgccaagtgtcaccacctacatcaacctcaatcccgggtaccgcgtgtacgag
gtggccggctcctaccccggcagctcccacgcggtcctggaccacgagaccttcatccta
aacctgacggaggccaacgcggcgccgccgggcactgccccgcgctggcggcggctctac
ggcgcgcgcgaggcctacgggctgcccgcggccttccccgccgactgggaccagctggtg
cggcgcatgcaggacgacgagccgctcttccagctcttctggttccacctgcacaagggg
cacccgccccgcgagccctgcggcggcccctgcaaggccgccctgctctgcgccctgcgc
tccggccgcgccgccgaccccgcgctctgccggcccctgcgccccgcgctgcccttcccg
cgcatccaggagctctggcagcagcggcggctctgctga
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